Detailed information    

insolico Bioinformatically predicted

Overview


Name   tsaP   Type   Machinery gene
Locus tag   ACEYW7_RS18955 Genome accession   NZ_CP169298
Coordinates   3952630..3953784 (+) Length   384 a.a.
NCBI ID   WP_000755271.1    Uniprot ID   A0A3R9DI43
Organism   Acinetobacter baumannii strain AMA205     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 3947630..3958784
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACEYW7_RS18930 (ACEYW7_18930) - 3947781..3948995 (+) 1215 WP_001177953.1 oxygenase MpaB family protein -
  ACEYW7_RS18935 (ACEYW7_18935) - 3949065..3949271 (-) 207 WP_000182542.1 hypothetical protein -
  ACEYW7_RS18940 (ACEYW7_18940) - 3949325..3951439 (-) 2115 WP_001120681.1 TonB-dependent copper receptor -
  ACEYW7_RS18945 (ACEYW7_18945) - 3951512..3951940 (-) 429 WP_000231981.1 DUF2946 family protein -
  ACEYW7_RS18950 (ACEYW7_18950) def 3951977..3952507 (-) 531 WP_001196539.1 peptide deformylase -
  ACEYW7_RS18955 (ACEYW7_18955) tsaP 3952630..3953784 (+) 1155 WP_000755271.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  ACEYW7_RS18960 (ACEYW7_18960) dprA 3953805..3954935 (+) 1131 WP_031971973.1 DNA-processing protein DprA Machinery gene
  ACEYW7_RS18965 (ACEYW7_18965) - 3954986..3955555 (+) 570 WP_000633612.1 L-threonylcarbamoyladenylate synthase -
  ACEYW7_RS18970 (ACEYW7_18970) - 3955947..3956867 (-) 921 WP_374857609.1 DMT family transporter -
  ACEYW7_RS18975 (ACEYW7_18975) - 3956973..3957623 (-) 651 WP_001984979.1 TetR/AcrR family transcriptional regulator -

Sequence


Protein


Download         Length: 384 a.a.        Molecular weight: 42331.23 Da        Isoelectric Point: 8.2524

>NTDB_id=1050344 ACEYW7_RS18955 WP_000755271.1 3952630..3953784(+) (tsaP) [Acinetobacter baumannii strain AMA205]
MKKVFNGMVNFHALGIKKHLLALALCTGVAIGTIAEVHATSPNHNPPSLKSNAPNVYVVKRGDTLWDISGHFLNKPWRWP
EIWASNQHVKNPHWIYPGDRLLLCSLDGHPLVGKDEGDGCVGIIRRYTGQTTNLQPQVRVEALNNSVPVIPLEHIKQWLE
NSTILPADSITNTPYIVGTADQRVLAGKGQTIYARGQGLINGQRYAVYREGEPYYFTDNKGKKHSLGIELLQVASGVAVS
SEKDITTLELTDSYNAEVRRGDRVMPEEQATLPTLFYPVDAKQVTDGGKIIRVMGSIGRAAKNSVVTLDRGTTQGIQVGQ
VFDITQQGESIRDPKTKEVIQLPGQQIGSLMVFRTFDQLSYAYVLESDLPIKVGSSIQPPQFND

Nucleotide


Download         Length: 1155 bp        

>NTDB_id=1050344 ACEYW7_RS18955 WP_000755271.1 3952630..3953784(+) (tsaP) [Acinetobacter baumannii strain AMA205]
ATGAAAAAGGTTTTTAACGGCATGGTTAATTTTCATGCCTTGGGGATAAAGAAGCATTTACTTGCCTTGGCGCTCTGTAC
AGGTGTCGCAATCGGTACGATAGCAGAGGTTCATGCAACCAGTCCGAACCATAATCCACCCTCACTTAAAAGTAATGCAC
CCAATGTATATGTTGTAAAACGTGGGGATACTTTATGGGATATTTCAGGACATTTTCTAAATAAACCATGGCGTTGGCCT
GAAATCTGGGCGAGCAACCAACATGTTAAAAATCCACACTGGATCTATCCGGGTGACCGATTACTATTATGTAGCCTAGA
TGGGCATCCTTTAGTCGGTAAAGATGAGGGCGATGGTTGTGTCGGTATTATTCGCCGCTATACAGGTCAAACCACAAACC
TACAACCACAAGTTCGCGTCGAAGCATTAAATAATAGCGTTCCAGTTATTCCACTTGAACATATTAAACAGTGGTTAGAG
AACAGTACTATTTTACCAGCCGATTCAATTACCAACACACCTTATATTGTTGGTACCGCCGATCAACGTGTACTTGCAGG
AAAAGGCCAGACCATTTACGCACGAGGACAAGGCTTAATTAATGGGCAGCGTTATGCAGTCTACCGAGAAGGTGAACCTT
ACTATTTCACAGACAATAAAGGTAAAAAGCATAGTTTAGGGATTGAACTACTACAGGTTGCTTCAGGTGTTGCGGTATCT
TCTGAAAAAGATATTACTACACTAGAACTAACAGATAGTTATAACGCTGAAGTACGTCGTGGCGATCGTGTTATGCCTGA
AGAGCAAGCTACTTTGCCAACATTATTTTACCCAGTAGATGCGAAGCAAGTGACGGATGGTGGCAAGATTATTCGTGTCA
TGGGTTCAATTGGCAGAGCTGCAAAAAATAGTGTAGTGACTTTGGACCGCGGTACAACTCAGGGCATCCAAGTAGGTCAA
GTTTTTGATATTACTCAACAAGGTGAATCAATTCGCGACCCTAAAACTAAAGAAGTAATTCAACTTCCTGGCCAACAAAT
TGGCAGTCTAATGGTTTTTAGAACTTTTGATCAGCTAAGTTATGCTTATGTTTTAGAGAGCGATTTACCAATTAAGGTTG
GTTCAAGCATTCAGCCACCTCAATTTAATGATTAA

Domains


Predicted by InterproScan.

(57-102)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A3R9DI43

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tsaP Acinetobacter baumannii D1279779

99.219

100

0.992


Multiple sequence alignment