Detailed information    

insolico Bioinformatically predicted

Overview


Name   kpsS   Type   Regulator
Locus tag   R8946_RS07145 Genome accession   NZ_AP028374
Coordinates   1387092..1388276 (-) Length   394 a.a.
NCBI ID   WP_002857981.1    Uniprot ID   Q0P8K1
Organism   Campylobacter jejuni strain BCH-10881     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 1382092..1393276
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  R8946_RS07120 (B10881_14100) fliL 1383240..1383776 (+) 537 WP_002868488.1 flagellar basal body-associated protein FliL -
  R8946_RS07125 (B10881_14110) acpS 1383776..1384123 (+) 348 WP_002825806.1 holo-ACP synthase -
  R8946_RS07130 (B10881_14120) - 1384124..1384543 (-) 420 WP_002780440.1 hypothetical protein -
  R8946_RS07135 (B10881_14130) - 1384540..1385901 (-) 1362 WP_002868489.1 cytochrome P450 -
  R8946_RS07140 (B10881_14140) - 1385898..1387019 (-) 1122 WP_002858304.1 membrane protein -
  R8946_RS07145 (B10881_14150) kpsS 1387092..1388276 (-) 1185 WP_002857981.1 capsule polysaccharide modification protein KpsS Regulator
  R8946_RS07150 (B10881_14160) kpsC 1388273..1390342 (-) 2070 WP_002878886.1 capsular polysaccharide biosynthesis protein -
  R8946_RS07155 (B10881_14170) cysC 1390339..1390851 (-) 513 WP_240370873.1 cytidine diphosphoramidate kinase -
  R8946_RS07160 (B10881_14180) - 1390841..1391602 (-) 762 WP_002825812.1 CTP:phosphoglutamine cytidylyltransferase -
  R8946_RS07165 (B10881_14190) - 1391604..1392206 (-) 603 WP_002859688.1 gamma-glutamyl-CDP-amidate hydrolase -

Sequence


Protein


Download         Length: 394 a.a.        Molecular weight: 46938.68 Da        Isoelectric Point: 9.9831

>NTDB_id=105029 R8946_RS07145 WP_002857981.1 1387092..1388276(-) (kpsS) [Campylobacter jejuni strain BCH-10881]
MRFSTKIKKEFSGKNVLLLQGPVGNFFHHLAVKMRKNQTKVFKLNFNGGDFFFYPSGTRCKCDEKDLENFYRDFFQNKKI
DAILMYNDCRIIHAKAIKVAKELGIEIWIFEEGYLRPYCITLEKDGVNANSSLPRDKNFYLSQNIFTKESIKEIPGGFKF
MAFDAFLYWLFAFILAPFFNNKLHHRTLYPFEFLFWFRSLYRKYLYKITEKKLNEKIYNLEKKYFLAILQVYSDTQIKYH
YKKSIEHFIEETILSFANHARAKSYLVFKHHPMDRGYKNYFKLINDLSRKYHVEGRVLYVHDTHLPVLLRKALGCITINS
TVGLSAILEGCPTKVCGNAFYNFEGLSYPKKLQFFWREAHAYKPNPVLVCNFKKYLLQTNQFNGNFYKNFFLDK

Nucleotide


Download         Length: 1185 bp        

>NTDB_id=105029 R8946_RS07145 WP_002857981.1 1387092..1388276(-) (kpsS) [Campylobacter jejuni strain BCH-10881]
ATGAGATTTAGCACTAAAATTAAAAAAGAATTTAGCGGTAAAAATGTTTTACTCTTGCAAGGGCCTGTGGGAAATTTTTT
TCATCATCTTGCAGTGAAAATGAGAAAAAACCAAACCAAAGTTTTTAAACTCAATTTTAACGGCGGAGATTTTTTTTTCT
ATCCTAGCGGAACGAGGTGTAAGTGTGATGAAAAAGATCTTGAAAATTTCTATAGAGATTTTTTTCAAAATAAAAAAATC
GATGCTATTTTAATGTATAATGATTGTCGCATTATACATGCTAAGGCTATTAAAGTGGCTAAAGAATTAGGAATTGAAAT
ATGGATTTTTGAAGAAGGATATTTAAGGCCTTATTGTATTACTTTGGAAAAAGATGGGGTGAATGCAAATTCTTCTTTAC
CGCGTGATAAAAATTTTTATCTTTCTCAAAATATTTTTACCAAAGAAAGCATAAAAGAAATTCCAGGTGGATTTAAATTT
ATGGCTTTTGATGCTTTTTTGTATTGGTTGTTTGCTTTTATTTTGGCTCCATTTTTTAACAACAAACTTCATCATCGCAC
TTTATATCCTTTTGAATTTTTATTTTGGTTTAGATCATTGTATAGAAAGTATCTTTATAAGATTACAGAAAAAAAACTAA
ATGAAAAGATTTATAATTTAGAAAAAAAGTACTTTTTGGCGATTTTACAAGTTTATAGCGATACGCAAATTAAATATCAT
TACAAAAAAAGCATAGAGCACTTTATAGAGGAAACCATACTTTCTTTTGCAAACCATGCAAGAGCTAAATCTTATCTAGT
TTTTAAACACCATCCCATGGATAGGGGCTATAAGAATTATTTTAAACTTATAAATGATTTAAGTCGAAAATATCATGTAG
AAGGAAGGGTTTTATATGTTCATGATACCCACTTGCCAGTTCTTTTAAGAAAGGCTTTGGGTTGTATTACTATAAATTCA
ACAGTAGGCCTTAGTGCTATTTTAGAAGGCTGTCCGACTAAGGTTTGTGGCAATGCTTTTTATAATTTTGAAGGCTTATC
TTATCCAAAAAAACTTCAATTTTTTTGGCGTGAAGCTCATGCTTATAAACCCAATCCTGTTTTGGTATGTAATTTTAAGA
AATATCTTTTACAAACTAATCAATTCAACGGCAATTTTTATAAAAATTTCTTTTTAGACAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q0P8K1

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kpsS Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

100

100

1


Multiple sequence alignment