Detailed information NTG1050237

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ABGU73_RS22875
• Genome accession: NZ_OZ040331
• Coordinates: 4702988..4704013 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644908.1
• Uniprot ID: -
• Organism: Escherichia coli isolate 30224_1#305
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4697988..4709013

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABGU73_RS22855	metJ	4699173..4699490 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
ABGU73_RS22860	yiiX	4699550..4700158 (+)	609	WP_000702314.1	YiiX family permuted papain-like enzyme	-
ABGU73_RS22865	rpmE	4700219..4700431 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
ABGU73_RS22870	priA	4700634..4702832 (+)	2199	WP_001296625.1	primosomal protein N'	Machinery gene
ABGU73_RS22875	cytR	4702988..4704013 (+)	1026	WP_000644908.1	DNA-binding transcriptional regulator CytR	Regulator
ABGU73_RS22880	ftsN	4704105..4705064 (+)	960	WP_000068834.1	cell division protein FtsN	-
ABGU73_RS22885	hslV	4705157..4705687 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ABGU73_RS22890	hslU	4705697..4707028 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
ABGU73_RS22895	menA	4707095..4708021 (+)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ABGU73_RS22900	rraA	4708114..4708599 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ABGU73_RS22905	zapB	4708684..4708929 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37847.80 Da
• Isoelectric Point: 6.3842

>NTDB_id=1050237 ABGU73_RS22875 WP_000644908.1 4702988..4704013(+) (cytR) [Escherichia coli isolate 30224_1#305]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSRAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=1050237 ABGU73_RS22875 WP_000644908.1 4702988..4704013(+) (cytR) [Escherichia coli isolate 30224_1#305]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAGAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGTCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625