Detailed information NTG0105002

Bioinformatically predicted

Overview

• Name: proC
• Type: Machinery gene
• Locus tag: R8947_RS03510
• Genome accession: NZ_AP028371
• Coordinates: 705258..705995 (-)
• Length: 245 a.a.
• NCBI ID: WP_002780246.1
• Uniprot ID: A0A5T1L8T6
• Organism: Campylobacter coli strain BCH-10879
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 700258..710995

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R8947_RS03470 (B10879_06910)	-	700371..701132 (+)	762	WP_025431509.1	ATP-binding protein	-
R8947_RS03475 (B10879_06920)	-	701129..701812 (+)	684	WP_002791740.1	3-methyladenine DNA glycosylase	-
R8947_RS03480 (B10879_06930)	thiD	701812..702624 (+)	813	WP_002797568.1	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	-
R8947_RS03485 (B10879_06940)	thiE	702614..703246 (+)	633	WP_002777120.1	thiamine phosphate synthase	-
R8947_RS03490 (B10879_06950)	-	703224..703853 (+)	630	WP_052774030.1	uroporphyrinogen-III synthase	-
R8947_RS03495 (B10879_06960)	-	703846..704298 (-)	453	WP_002777117.1	hypothetical protein	-
R8947_RS03500 (B10879_06970)	-	704295..704963 (-)	669	WP_052774029.1	hypothetical protein	-
R8947_RS03505 (B10879_06980)	ctsT	704956..705261 (-)	306	WP_052774028.1	hypothetical protein	Machinery gene
R8947_RS03510 (B10879_06990)	proC	705258..705995 (-)	738	WP_002780246.1	pyrroline-5-carboxylate reductase	Machinery gene
R8947_RS03515 (B10879_07000)	fliW	705995..706384 (-)	390	WP_002777093.1	flagellar assembly protein FliW	-
R8947_RS03520 (B10879_07010)	-	706548..707195 (+)	648	WP_002780248.1	outer membrane protein assembly factor BamD	-
R8947_RS03525 (B10879_07020)	lon	707211..709586 (+)	2376	WP_057044711.1	endopeptidase La	-
R8947_RS03530 (B10879_07030)	rpsR	709643..709903 (-)	261	WP_002777087.1	30S ribosomal protein S18	-
R8947_RS03535 (B10879_07040)	-	709914..710462 (-)	549	WP_002777084.1	single-stranded DNA-binding protein	-
R8947_RS03540 (B10879_07050)	rpsF	710471..710848 (-)	378	WP_002777082.1	30S ribosomal protein S6	-

Sequence

Protein

• Length: 245 a.a.
• Molecular weight: 26797.20 Da
• Isoelectric Point: 9.3032

>NTDB_id=105002 R8947_RS03510 WP_002780246.1 705258..705995(-) (proC) [Campylobacter coli strain BCH-10879]
MKADLYILANGAMAQALAYGLKDSYNIYIVGRNLEKLQILEKEGFKTLLYKDFNIENKNIILAFKPYALESVAANLKGKA
KILISVLANTDFDKLKLIQAQNYARIMPNTAAKYKASTTPYVLKNSNFKDEVIEILNTFGKAYELNEEKQMNAAMAISGC
APAFLALVAESIANAGVYEGLSKELSLNLTRSLFKSAAALLENEHPAIIKENICSPAGVTIKGIKVLEQKGIRGTFFEAL
NASAT

Nucleotide

• Length: 738 bp

>NTDB_id=105002 R8947_RS03510 WP_002780246.1 705258..705995(-) (proC) [Campylobacter coli strain BCH-10879]
ATGAAAGCTGATTTATATATACTTGCTAATGGTGCGATGGCGCAAGCTTTGGCTTATGGATTAAAAGATTCTTATAATAT
CTATATAGTCGGTAGAAATTTAGAAAAGCTTCAAATTTTAGAAAAAGAAGGTTTTAAAACTTTACTCTATAAAGATTTTA
ATATAGAAAATAAAAATATTATCTTAGCTTTTAAACCTTATGCCTTAGAAAGTGTCGCAGCAAATTTAAAAGGCAAGGCA
AAAATTTTAATTTCAGTTTTAGCCAATACGGATTTTGATAAATTAAAACTTATCCAAGCCCAAAATTATGCAAGGATAAT
GCCAAATACAGCAGCTAAATATAAAGCTTCCACAACTCCTTATGTTTTAAAAAATTCAAATTTTAAAGATGAAGTCATAG
AAATTTTAAATACTTTTGGCAAAGCTTATGAGTTAAACGAAGAAAAACAAATGAATGCTGCCATGGCTATAAGCGGTTGC
GCTCCTGCTTTTTTAGCATTAGTAGCTGAAAGCATTGCTAATGCTGGCGTGTATGAAGGATTATCAAAAGAGCTGAGTCT
AAATCTCACTCGTTCGCTTTTTAAAAGTGCTGCAGCCTTGCTAGAAAACGAGCACCCAGCCATCATTAAGGAAAATATCT
GCTCGCCTGCAGGTGTTACCATAAAAGGGATTAAAGTATTAGAGCAAAAAGGTATCCGTGGGACTTTTTTTGAGGCTCTT
AATGCTAGTGCAACATGA

Domains

Predicted by InterproScan.

• NADP oxidoreductase coenzyme F420-dependent (F420_oxidored) (7-88)

• Pyrroline-5-carboxylate reductase dimerisation (P5CR_dimer) (148-244)

3D structure

• AlphaFold DB: A0A5T1L8T6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
proC	Campylobacter jejuni subsp. jejuni 81-176	80.833	97.959	0.792