Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | ACEPPU_RS23465 | Genome accession | NZ_CP169254 |
| Coordinates | 4463956..4465008 (-) | Length | 350 a.a. |
| NCBI ID | WP_013059177.1 | Uniprot ID | A0A8D4BHW7 |
| Organism | Priestia aryabhattai strain YB01 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 4458956..4470008
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACEPPU_RS23425 (ACEPPU_23425) | - | 4459971..4460795 (+) | 825 | WP_013059169.1 | YqhG family protein | - |
| ACEPPU_RS23430 (ACEPPU_23430) | - | 4460820..4461005 (-) | 186 | WP_013059170.1 | YqzE family protein | - |
| ACEPPU_RS23435 (ACEPPU_23435) | comGG | 4461049..4461423 (-) | 375 | WP_013059171.1 | competence type IV pilus minor pilin ComGG | - |
| ACEPPU_RS23440 (ACEPPU_23440) | comGF | 4461413..4461850 (-) | 438 | WP_013059172.1 | competence type IV pilus minor pilin ComGF | - |
| ACEPPU_RS23445 (ACEPPU_23445) | - | 4461847..4462185 (-) | 339 | WP_013059173.1 | type II secretion system protein | - |
| ACEPPU_RS23450 (ACEPPU_23450) | comGD | 4462169..4462606 (-) | 438 | WP_013059174.1 | competence type IV pilus minor pilin ComGD | - |
| ACEPPU_RS23455 (ACEPPU_23455) | comGC | 4462593..4462904 (-) | 312 | WP_013059175.1 | competence type IV pilus major pilin ComGC | - |
| ACEPPU_RS23460 (ACEPPU_23460) | comGB | 4462919..4463965 (-) | 1047 | WP_013059176.1 | competence type IV pilus assembly protein ComGB | - |
| ACEPPU_RS23465 (ACEPPU_23465) | comGA | 4463956..4465008 (-) | 1053 | WP_013059177.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| ACEPPU_RS23470 (ACEPPU_23470) | - | 4465278..4465661 (-) | 384 | WP_013059178.1 | Spx/MgsR family RNA polymerase-binding regulatory protein | - |
| ACEPPU_RS23475 (ACEPPU_23475) | - | 4465923..4466159 (+) | 237 | WP_013059179.1 | DUF2626 domain-containing protein | - |
| ACEPPU_RS23480 (ACEPPU_23480) | - | 4466197..4466829 (-) | 633 | WP_013059180.1 | MBL fold metallo-hydrolase | - |
| ACEPPU_RS23485 (ACEPPU_23485) | - | 4467038..4467214 (+) | 177 | WP_013059181.1 | DUF2759 domain-containing protein | - |
| ACEPPU_RS23490 (ACEPPU_23490) | - | 4467250..4468152 (-) | 903 | WP_013059182.1 | M14 family metallocarboxypeptidase | - |
| ACEPPU_RS23495 (ACEPPU_23495) | - | 4468264..4469232 (-) | 969 | WP_013059183.1 | ROK family glucokinase | - |
| ACEPPU_RS23500 (ACEPPU_23500) | - | 4469235..4469441 (-) | 207 | WP_013059184.1 | YqgQ family protein | - |
Sequence
Protein
Download Length: 350 a.a. Molecular weight: 39625.02 Da Isoelectric Point: 9.0586
>NTDB_id=1049994 ACEPPU_RS23465 WP_013059177.1 4463956..4465008(-) (comGA) [Priestia aryabhattai strain YB01]
MTEIEQFATYIIRDACECRSSDVHIVPRKKDAVIQLRIDQELILKRVISKEMSERLISHFKFLGGMDIGERRKPQNGALT
TSIDHYQVNLRLSTLPTSHDESLVIRLLPHQQSTSLKHLSLFPEHTKKLISLLKFSHGLIIFTGPTGSGKTTTLYTLLHE
VKHLFNRNVITLEDPIEKPSETVLQVQVNERAGITYTTGLKAILRHDPDIIMVGEIRDSETAKIAVRAALTGHLVLTTMH
TKDTKGSLYRLLEFGVSFQEMEQTLVAVAAQRLVEIRCPLCSGKCHPACKKMRKHRQSSIYELLYGKELSAVMREVKGEN
ADYDYKTLRDVILKGIALGYLYPHSLDGWG
MTEIEQFATYIIRDACECRSSDVHIVPRKKDAVIQLRIDQELILKRVISKEMSERLISHFKFLGGMDIGERRKPQNGALT
TSIDHYQVNLRLSTLPTSHDESLVIRLLPHQQSTSLKHLSLFPEHTKKLISLLKFSHGLIIFTGPTGSGKTTTLYTLLHE
VKHLFNRNVITLEDPIEKPSETVLQVQVNERAGITYTTGLKAILRHDPDIIMVGEIRDSETAKIAVRAALTGHLVLTTMH
TKDTKGSLYRLLEFGVSFQEMEQTLVAVAAQRLVEIRCPLCSGKCHPACKKMRKHRQSSIYELLYGKELSAVMREVKGEN
ADYDYKTLRDVILKGIALGYLYPHSLDGWG
Nucleotide
Download Length: 1053 bp
>NTDB_id=1049994 ACEPPU_RS23465 WP_013059177.1 4463956..4465008(-) (comGA) [Priestia aryabhattai strain YB01]
TTGACCGAAATTGAACAGTTTGCTACTTACATTATACGAGATGCATGTGAGTGCCGAAGTTCTGATGTGCATATTGTGCC
CCGAAAGAAAGATGCTGTGATTCAGCTGCGAATTGACCAGGAGCTTATTTTAAAGAGGGTTATTTCAAAGGAAATGTCTG
AACGGCTCATTTCGCATTTTAAATTTTTAGGGGGAATGGATATTGGCGAGCGCAGAAAACCTCAAAATGGTGCATTGACC
ACTTCCATTGATCACTATCAAGTAAATTTGCGTTTATCAACCCTTCCTACTTCTCATGATGAAAGTCTTGTTATTCGGCT
TTTGCCTCATCAACAATCTACATCTCTCAAACATTTATCTCTTTTTCCTGAACACACTAAAAAGCTTATTTCTCTCTTGA
AATTCTCTCATGGATTAATTATTTTTACCGGTCCTACAGGGTCAGGTAAAACCACTACTCTATATACTCTTTTACACGAA
GTAAAGCACCTTTTTAATCGAAATGTTATTACACTAGAAGATCCTATTGAAAAACCGAGTGAAACCGTGCTTCAAGTACA
GGTAAATGAACGGGCGGGGATTACGTACACGACTGGTTTAAAAGCTATATTGCGCCATGACCCAGACATTATCATGGTGG
GAGAAATAAGAGATAGTGAGACTGCCAAAATTGCTGTGAGAGCAGCACTTACCGGACACTTGGTTTTGACAACGATGCAT
ACTAAAGATACAAAAGGATCTTTGTACAGGCTGCTTGAATTTGGGGTTAGCTTTCAAGAAATGGAACAGACTCTTGTAGC
AGTAGCTGCACAGCGCCTTGTAGAAATTCGCTGTCCGCTGTGTTCCGGAAAATGCCACCCCGCTTGTAAAAAAATGAGAA
AGCATCGTCAGTCCAGCATATACGAATTGCTTTATGGCAAGGAGCTTAGTGCAGTGATGAGAGAAGTGAAAGGAGAAAAT
GCGGATTATGATTATAAGACGCTCCGAGATGTGATTCTAAAAGGAATCGCGCTAGGCTATTTATATCCGCATTCGCTAGA
CGGATGGGGGTAA
TTGACCGAAATTGAACAGTTTGCTACTTACATTATACGAGATGCATGTGAGTGCCGAAGTTCTGATGTGCATATTGTGCC
CCGAAAGAAAGATGCTGTGATTCAGCTGCGAATTGACCAGGAGCTTATTTTAAAGAGGGTTATTTCAAAGGAAATGTCTG
AACGGCTCATTTCGCATTTTAAATTTTTAGGGGGAATGGATATTGGCGAGCGCAGAAAACCTCAAAATGGTGCATTGACC
ACTTCCATTGATCACTATCAAGTAAATTTGCGTTTATCAACCCTTCCTACTTCTCATGATGAAAGTCTTGTTATTCGGCT
TTTGCCTCATCAACAATCTACATCTCTCAAACATTTATCTCTTTTTCCTGAACACACTAAAAAGCTTATTTCTCTCTTGA
AATTCTCTCATGGATTAATTATTTTTACCGGTCCTACAGGGTCAGGTAAAACCACTACTCTATATACTCTTTTACACGAA
GTAAAGCACCTTTTTAATCGAAATGTTATTACACTAGAAGATCCTATTGAAAAACCGAGTGAAACCGTGCTTCAAGTACA
GGTAAATGAACGGGCGGGGATTACGTACACGACTGGTTTAAAAGCTATATTGCGCCATGACCCAGACATTATCATGGTGG
GAGAAATAAGAGATAGTGAGACTGCCAAAATTGCTGTGAGAGCAGCACTTACCGGACACTTGGTTTTGACAACGATGCAT
ACTAAAGATACAAAAGGATCTTTGTACAGGCTGCTTGAATTTGGGGTTAGCTTTCAAGAAATGGAACAGACTCTTGTAGC
AGTAGCTGCACAGCGCCTTGTAGAAATTCGCTGTCCGCTGTGTTCCGGAAAATGCCACCCCGCTTGTAAAAAAATGAGAA
AGCATCGTCAGTCCAGCATATACGAATTGCTTTATGGCAAGGAGCTTAGTGCAGTGATGAGAGAAGTGAAAGGAGAAAAT
GCGGATTATGATTATAAGACGCTCCGAGATGTGATTCTAAAAGGAATCGCGCTAGGCTATTTATATCCGCATTCGCTAGA
CGGATGGGGGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
58.571 |
100 |
0.586 |