Detailed information
Bioinformatically predicted
Overview
| Name | nucA/comI | Type | Machinery gene |
| Locus tag | ACEPPU_RS17095 | Genome accession | NZ_CP169254 |
| Coordinates | 3309037..3309459 (+) | Length | 140 a.a. |
| NCBI ID | WP_013057949.1 | Uniprot ID | A0A8D3X0F8 |
| Organism | Priestia aryabhattai strain YB01 | ||
| Function | cleavage of dsDNA into ssDNA (predicted from homology) DNA processing |
||
Genomic Context
Location: 3304037..3314459
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACEPPU_RS17070 (ACEPPU_17070) | - | 3304276..3305097 (+) | 822 | WP_029322903.1 | sensor histidine kinase | - |
| ACEPPU_RS17075 (ACEPPU_17075) | - | 3305098..3305739 (+) | 642 | WP_053487482.1 | response regulator transcription factor | - |
| ACEPPU_RS17080 (ACEPPU_17080) | - | 3305915..3306907 (+) | 993 | WP_029322907.1 | glycerophosphodiester phosphodiesterase family protein | - |
| ACEPPU_RS17085 (ACEPPU_17085) | - | 3307020..3308402 (+) | 1383 | WP_082522657.1 | PepSY domain-containing protein | - |
| ACEPPU_RS17090 (ACEPPU_17090) | - | 3308432..3308896 (+) | 465 | WP_252281580.1 | FixH family protein | - |
| ACEPPU_RS17095 (ACEPPU_17095) | nucA/comI | 3309037..3309459 (+) | 423 | WP_013057949.1 | NucA/NucB deoxyribonuclease domain-containing protein | Machinery gene |
| ACEPPU_RS17100 (ACEPPU_17100) | - | 3309613..3309966 (+) | 354 | WP_223272376.1 | DUF1516 family protein | - |
| ACEPPU_RS17105 (ACEPPU_17105) | - | 3310007..3310600 (-) | 594 | WP_013057951.1 | hypothetical protein | - |
| ACEPPU_RS17110 (ACEPPU_17110) | - | 3310756..3311412 (-) | 657 | WP_252281581.1 | TetR/AcrR family transcriptional regulator | - |
| ACEPPU_RS17115 (ACEPPU_17115) | - | 3311436..3312716 (-) | 1281 | WP_252281582.1 | glycosyltransferase | - |
| ACEPPU_RS17120 (ACEPPU_17120) | - | 3313015..3313560 (+) | 546 | WP_013057954.1 | GNAT family N-acetyltransferase | - |
| ACEPPU_RS17125 (ACEPPU_17125) | - | 3313860..3314345 (-) | 486 | WP_053487488.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 140 a.a. Molecular weight: 15329.17 Da Isoelectric Point: 4.4990
>NTDB_id=1049984 ACEPPU_RS17095 WP_013057949.1 3309037..3309459(+) (nucA/comI) [Priestia aryabhattai strain YB01]
MKKIVSGILILVLAVIVMIEGNPLEQNSSTNTSYDEVITFPADRYPETAAHIQHAIDKGKSAVCTIDRDGAEENRRESLK
GIPTKSGYDRDEFPMAFCEEGGSGADIEYVKPSDNRGAGSWISHQVDEFPDGTKVLIEVK
MKKIVSGILILVLAVIVMIEGNPLEQNSSTNTSYDEVITFPADRYPETAAHIQHAIDKGKSAVCTIDRDGAEENRRESLK
GIPTKSGYDRDEFPMAFCEEGGSGADIEYVKPSDNRGAGSWISHQVDEFPDGTKVLIEVK
Nucleotide
Download Length: 423 bp
>NTDB_id=1049984 ACEPPU_RS17095 WP_013057949.1 3309037..3309459(+) (nucA/comI) [Priestia aryabhattai strain YB01]
TTGAAAAAAATTGTTTCTGGTATTTTAATTTTAGTATTAGCCGTTATTGTTATGATTGAAGGAAATCCGTTAGAGCAGAA
CTCTTCAACGAATACCTCCTACGATGAAGTAATTACCTTCCCTGCTGATCGTTACCCTGAAACTGCAGCGCACATTCAAC
ATGCAATCGATAAAGGAAAATCGGCTGTTTGTACAATCGACCGAGACGGGGCTGAGGAAAACCGCCGTGAGTCTTTAAAA
GGCATTCCGACTAAAAGCGGCTATGACCGAGATGAGTTTCCGATGGCCTTTTGTGAAGAAGGCGGAAGCGGTGCCGATAT
TGAATATGTAAAGCCTTCAGACAATCGAGGCGCCGGGTCTTGGATCTCACATCAAGTAGACGAGTTTCCTGACGGTACGA
AGGTTTTAATTGAAGTGAAGTAA
TTGAAAAAAATTGTTTCTGGTATTTTAATTTTAGTATTAGCCGTTATTGTTATGATTGAAGGAAATCCGTTAGAGCAGAA
CTCTTCAACGAATACCTCCTACGATGAAGTAATTACCTTCCCTGCTGATCGTTACCCTGAAACTGCAGCGCACATTCAAC
ATGCAATCGATAAAGGAAAATCGGCTGTTTGTACAATCGACCGAGACGGGGCTGAGGAAAACCGCCGTGAGTCTTTAAAA
GGCATTCCGACTAAAAGCGGCTATGACCGAGATGAGTTTCCGATGGCCTTTTGTGAAGAAGGCGGAAGCGGTGCCGATAT
TGAATATGTAAAGCCTTCAGACAATCGAGGCGCCGGGTCTTGGATCTCACATCAAGTAGACGAGTTTCCTGACGGTACGA
AGGTTTTAATTGAAGTGAAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| nucA/comI | Bacillus subtilis subsp. subtilis str. 168 |
61.207 |
82.857 |
0.507 |