Detailed information NTG1049809

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ABGU53_RS23195
• Genome accession: NZ_OZ040091
• Coordinates: 4732006..4733031 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644908.1
• Uniprot ID: -
• Organism: Escherichia coli isolate 30602_6#35
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4727006..4738031

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABGU53_RS23175	metJ	4728191..4728508 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
ABGU53_RS23180	yiiX	4728568..4729176 (+)	609	WP_000702314.1	YiiX family permuted papain-like enzyme	-
ABGU53_RS23185	rpmE	4729237..4729449 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
ABGU53_RS23190	priA	4729652..4731850 (+)	2199	WP_001296625.1	primosomal protein N'	Machinery gene
ABGU53_RS23195	cytR	4732006..4733031 (+)	1026	WP_000644908.1	DNA-binding transcriptional regulator CytR	Regulator
ABGU53_RS23200	ftsN	4733123..4734082 (+)	960	WP_000068834.1	cell division protein FtsN	-
ABGU53_RS23205	hslV	4734175..4734705 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ABGU53_RS23210	hslU	4734715..4736046 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
ABGU53_RS23215	menA	4736113..4737039 (+)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ABGU53_RS23220	rraA	4737132..4737617 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ABGU53_RS23225	zapB	4737702..4737947 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37847.80 Da
• Isoelectric Point: 6.3842

>NTDB_id=1049809 ABGU53_RS23195 WP_000644908.1 4732006..4733031(+) (cytR) [Escherichia coli isolate 30602_6#35]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSRAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=1049809 ABGU53_RS23195 WP_000644908.1 4732006..4733031(+) (cytR) [Escherichia coli isolate 30602_6#35]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAGAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGTCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625