Detailed information NTG1049786

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: ACETWS_RS22890
• Genome accession: NZ_CP169073
• Coordinates: 5060634..5061854 (+)
• Length: 406 a.a.
• NCBI ID: WP_016449076.1
• Uniprot ID: A0AAU0LD35
• Organism: Delftia lacustris strain ZWP15
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 5055634..5066854

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACETWS_RS22870 (ACETWS_22870)	coaD	5056404..5056904 (-)	501	WP_016449072.1	pantetheine-phosphate adenylyltransferase	-
ACETWS_RS22875 (ACETWS_22875)	rsmD	5057035..5057742 (-)	708	WP_374006013.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
ACETWS_RS22880 (ACETWS_22880)	-	5057739..5059100 (-)	1362	WP_374006014.1	M16 family metallopeptidase	-
ACETWS_RS22885 (ACETWS_22885)	-	5059127..5060605 (-)	1479	WP_374006015.1	M16 family metallopeptidase	-
ACETWS_RS22890 (ACETWS_22890)	pilA	5060634..5061854 (+)	1221	WP_016449076.1	signal recognition particle-docking protein FtsY	Machinery gene
ACETWS_RS22895 (ACETWS_22895)	-	5062787..5063524 (+)	738	WP_241150346.1	GntR family transcriptional regulator	-
ACETWS_RS22900 (ACETWS_22900)	-	5064048..5064977 (+)	930	WP_374006016.1	EamA/RhaT family transporter	-
ACETWS_RS22905 (ACETWS_22905)	-	5065302..5066291 (+)	990	WP_374006017.1	Bug family tripartite tricarboxylate transporter substrate binding protein	-
ACETWS_RS22910 (ACETWS_22910)	cutA	5066278..5066676 (-)	399	WP_374006018.1	divalent-cation tolerance protein CutA	-

Sequence

Protein

• Length: 406 a.a.
• Molecular weight: 42448.31 Da
• Isoelectric Point: 5.5266

>NTDB_id=1049786 ACETWS_RS22890 WP_016449076.1 5060634..5061854(+) (pilA) [Delftia lacustris strain ZWP15]
MFSFFKKKPTPSSAEISPADSSAAPEEAGIPATPPQDRAPDLPPGTPAPPAAADTGSAWWRKPFGGGKGDAAPPAAPAAP
TAAASTLAPADFIAAPEPTAKPEAEGASRQNWMQRLKAGLRKTGSSIATVFTGTQINDALYEELEDALLMADTGVKATEH
LLTDLRRRVKEAKATDPAAVKALLADALADLLRPLEKPLIIGEHQPTVVMVAGVNGAGKTTSIGKLTKHLADEGQSVLLA
AADTFRAAAREQLGVWANRNTVEIVSQEGGDPAAVSFDAVTAGRARKKDVVLVDTAGRLPTQLHLMEELRKIRRVVTKAD
ATAPHEVLLVIDGNTGQNALAQVRAFDDALQLTGLIVTKLDGTAKGGVLAAIAQERPIPVYFIGVGEKVEDLETFNAREF
AQALLS

Nucleotide

• Length: 1221 bp

>NTDB_id=1049786 ACETWS_RS22890 WP_016449076.1 5060634..5061854(+) (pilA) [Delftia lacustris strain ZWP15]
ATGTTCAGTTTTTTCAAGAAAAAGCCCACCCCCTCCTCCGCCGAGATTTCCCCGGCGGACAGCAGCGCCGCGCCTGAAGA
GGCCGGCATTCCCGCAACCCCGCCGCAGGACCGCGCCCCAGACCTGCCCCCTGGCACACCTGCCCCACCGGCCGCAGCCG
ACACCGGCAGCGCCTGGTGGCGCAAGCCCTTCGGCGGCGGCAAGGGCGATGCCGCCCCGCCTGCCGCACCCGCTGCACCC
ACTGCTGCTGCTTCCACGCTCGCGCCTGCCGACTTCATTGCCGCACCCGAGCCCACGGCCAAGCCCGAAGCCGAAGGCGC
CAGCCGCCAGAACTGGATGCAGCGCCTCAAGGCCGGACTGCGCAAGACCGGCAGCAGCATCGCCACGGTCTTCACCGGCA
CGCAGATCAACGATGCGCTGTACGAAGAGCTGGAAGACGCCCTGCTGATGGCCGACACCGGCGTCAAGGCCACCGAGCAC
CTGCTCACCGACCTGCGCCGCCGCGTCAAGGAAGCCAAGGCCACCGACCCCGCCGCCGTCAAGGCGTTGCTGGCCGATGC
ACTGGCCGACCTGCTGCGCCCGCTGGAAAAGCCGCTGATCATCGGCGAGCACCAGCCTACCGTGGTCATGGTCGCTGGCG
TCAACGGCGCAGGCAAGACCACCTCCATCGGCAAGCTGACCAAGCATCTGGCCGACGAAGGCCAGAGTGTGCTGCTGGCT
GCCGCCGACACCTTCCGCGCCGCCGCGCGCGAGCAGCTCGGCGTCTGGGCCAACCGCAACACGGTGGAGATCGTCAGCCA
GGAAGGCGGTGATCCTGCAGCCGTGAGCTTTGATGCCGTCACCGCCGGCCGCGCCCGCAAGAAGGATGTGGTGCTGGTGG
ACACGGCGGGCCGCCTGCCCACCCAGCTGCACCTGATGGAAGAGCTGCGCAAGATCCGCCGCGTGGTCACCAAGGCCGAT
GCCACGGCACCGCACGAGGTGCTGCTGGTCATCGACGGCAACACCGGCCAGAACGCGCTGGCCCAGGTGCGCGCCTTTGA
CGATGCACTGCAGCTCACGGGCCTGATCGTCACCAAGCTCGACGGCACGGCCAAGGGCGGCGTGCTGGCCGCCATTGCCC
AGGAACGGCCGATCCCCGTGTACTTCATCGGCGTGGGCGAAAAGGTCGAGGACCTGGAGACCTTCAACGCCAGGGAATTC
GCGCAGGCGCTGCTGTCCTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (206-405)

• SRP54-type protein, helical bundle domain (SRP54_N) (125-188)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	48.227	100	0.502