Detailed information NTG0104971

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: R8621_RS05615
• Genome accession: NZ_AP028370
• Coordinates: 1092122..1093072 (+)
• Length: 316 a.a.
• NCBI ID: WP_201459076.1
• Uniprot ID: -
• Organism: Campylobacter jejuni strain BCH-10767
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1087122..1098072

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R8621_RS05585 (B10767_11000)	-	1087600..1088196 (-)	597	WP_308043114.1	hypothetical protein	-
R8621_RS05590 (B10767_11010)	-	1088228..1089166 (-)	939	WP_317651489.1	sulfatase-like hydrolase/transferase	-
R8621_RS05595 (B10767_11020)	-	1089075..1089263 (-)	189	WP_032682936.1	sulfatase-like hydrolase/transferase	-
R8621_RS05600 (B10767_11030)	-	1089273..1089743 (-)	471	WP_201459077.1	hypothetical protein	-
R8621_RS05605 (B10767_11040)	-	1090106..1091233 (-)	1128	WP_002835154.1	polysaccharide pyruvyl transferase family protein	-
R8621_RS05610 (B10767_11050)	waaV	1091245..1092063 (-)	819	WP_167843153.1	glycosyltransferase family 2 protein	-
R8621_RS05615 (B10767_11060)	waaF	1092122..1093072 (+)	951	WP_201459076.1	lipopolysaccharide heptosyltransferase II	Regulator
R8621_RS05620 (B10767_11070)	-	1093124..1094623 (+)	1500	WP_308043113.1	MBOAT family O-acyltransferase	-
R8621_RS05625 (B10767_11080)	-	1094771..1095748 (+)	978	WP_171838408.1	hypothetical protein	-
R8621_RS05630 (B10767_11090)	gmhA	1095752..1096312 (-)	561	WP_072236394.1	D-sedoheptulose 7-phosphate isomerase	-
R8621_RS05635 (B10767_11100)	rfaE1	1096309..1097694 (-)	1386	WP_249624000.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-

Sequence

Protein

• Length: 316 a.a.
• Molecular weight: 36328.89 Da
• Isoelectric Point: 10.2671

>NTDB_id=104971 R8621_RS05615 WP_201459076.1 1092122..1093072(+) (waaF) [Campylobacter jejuni strain BCH-10767]
MKIFIHLPTWLGDAVMASPALYAIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKQTRYKQALSLRKELGKIDFSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQSPLVLKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHISAVYKIKTVAIFGPTKFTQTSPWQNENAKLVHLDLACMPCMQKTCPLKHHKCMKDLKPERVIEEIKKLSTL

Nucleotide

• Length: 951 bp

>NTDB_id=104971 R8621_RS05615 WP_201459076.1 1092122..1093072(+) (waaF) [Campylobacter jejuni strain BCH-10767]
ATGAAAATTTTTATACATCTTCCCACTTGGCTAGGCGATGCGGTGATGGCTTCACCTGCTTTATACGCTATAAAAGAACA
TTTTAAAAATGCCCAATTTATCCTTTATGGCTCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATTA
TCATAGAAAATAAACAAACCCGTTATAAACAAGCCCTATCTTTACGCAAAGAACTTGGTAAGATCGATTTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTGCATATTCTTAAAACGAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTAGTATAAAAGCTCATTTTAAAGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAGCCCTCTTGTCTTAAAAAATGGCAAAAAAATTCTAGGACTCAACCCTGGTGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAGATTTT
AATCTTTGGTGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGACCTATGCATATAAGTGCGGTCTATAAGATAAAAACCGTGGCTATTTTTGGTCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAACGAAAATGCAAAATTAGTGCATTTAGATCTAGCTTGCATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATTTAAAGCCTGAAAGAGTGATAGAAGAAATTAAAAAATTAAGCACCCTATAA

Domains

Predicted by InterproScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (96-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	94.249	99.051	0.934