Detailed information NTG1049707

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: ACETWW_RS02015
• Genome accession: NZ_CP169072
• Coordinates: 397293..398441 (+)
• Length: 382 a.a.
• NCBI ID: WP_007410270.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain T971
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 392293..403441

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACETWW_RS01995 (ACETWW_01985)	-	392690..393373 (-)	684	WP_374004757.1	ABC transporter ATP-binding protein	-
ACETWW_RS02000 (ACETWW_01990)	-	393388..394824 (-)	1437	WP_099566394.1	ABC transporter permease	-
ACETWW_RS02005 (ACETWW_01995)	-	395037..395720 (+)	684	WP_007410267.1	response regulator transcription factor	-
ACETWW_RS02010 (ACETWW_02000)	-	395707..397140 (+)	1434	WP_162992601.1	sensor histidine kinase	-
ACETWW_RS02015 (ACETWW_02005)	rapC	397293..398441 (+)	1149	WP_007410270.1	Rap family tetratricopeptide repeat protein	Regulator
ACETWW_RS02020 (ACETWW_02010)	phrC	398425..398544 (+)	120	WP_003156334.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
ACETWW_RS02025 (ACETWW_02015)	-	398693..398803 (-)	111	WP_369719092.1	YjcZ family sporulation protein	-
ACETWW_RS02030 (ACETWW_02020)	-	398883..400247 (-)	1365	WP_025284228.1	aspartate kinase	-
ACETWW_RS02035 (ACETWW_02025)	ceuB	400661..401614 (+)	954	WP_059366593.1	ABC transporter permease	Machinery gene
ACETWW_RS02040 (ACETWW_02030)	-	401604..402551 (+)	948	WP_007410274.1	iron chelate uptake ABC transporter family permease subunit	-
ACETWW_RS02045 (ACETWW_02035)	-	402545..403303 (+)	759	WP_003156330.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45475.70 Da
• Isoelectric Point: 4.9916

>NTDB_id=1049707 ACETWW_RS02015 WP_007410270.1 397293..398441(+) (rapC) [Bacillus velezensis strain T971]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDHMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEET
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=1049707 ACETWW_RS02015 WP_007410270.1 397293..398441(+) (rapC) [Bacillus velezensis strain T971]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTATCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCATATGGAGCCTGATTCGAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCACGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAATGCTTATGAAATTTACGTAGAGCAGGACACATATAACGTCCGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTCGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAACA
ATCAGCGCGTGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAAATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAAGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.461	100	0.825
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568