Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | R8621_RS05275 | Genome accession | NZ_AP028370 |
| Coordinates | 1024402..1024704 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain BCH-10767 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1019402..1029704
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R8621_RS05250 (B10767_10330) | rpsR | 1019764..1020024 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| R8621_RS05255 (B10767_10340) | lon | 1020085..1022460 (-) | 2376 | WP_002853487.1 | endopeptidase La | - |
| R8621_RS05260 (B10767_10350) | - | 1022477..1023124 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| R8621_RS05265 (B10767_10360) | fliW | 1023285..1023674 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| R8621_RS05270 (B10767_10370) | proC | 1023674..1024405 (+) | 732 | WP_002859150.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| R8621_RS05275 (B10767_10380) | ctsT | 1024402..1024704 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| R8621_RS05280 (B10767_10390) | - | 1024701..1025363 (+) | 663 | WP_199381292.1 | hypothetical protein | - |
| R8621_RS05285 (B10767_10400) | - | 1025360..1025812 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| R8621_RS05290 (B10767_10410) | hemD | 1025809..1026438 (-) | 630 | WP_002859147.1 | uroporphyrinogen-III synthase | - |
| R8621_RS05295 (B10767_10420) | thiE | 1026416..1027048 (-) | 633 | WP_052779711.1 | thiamine phosphate synthase | - |
| R8621_RS05300 (B10767_10430) | thiD | 1027038..1027850 (-) | 813 | WP_002873290.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| R8621_RS05305 (B10767_10440) | - | 1027847..1028533 (-) | 687 | WP_165434576.1 | endonuclease III domain-containing protein | - |
| R8621_RS05310 (B10767_10450) | - | 1028530..1029291 (-) | 762 | WP_199381290.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=104969 R8621_RS05275 WP_002853046.1 1024402..1024704(+) (ctsT) [Campylobacter jejuni strain BCH-10767]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=104969 R8621_RS05275 WP_002853046.1 1024402..1024704(+) (ctsT) [Campylobacter jejuni strain BCH-10767]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGACGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGACGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |