Detailed information NTG0104944

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: R8620_RS05760
• Genome accession: NZ_AP028369
• Coordinates: 1109239..1110198 (+)
• Length: 319 a.a.
• NCBI ID: WP_052804526.1
• Uniprot ID: -
• Organism: Campylobacter jejuni strain BCH-10666
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1104239..1115198

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R8620_RS05740 (B10666_11380)	-	1104914..1105840 (-)	927	WP_052804523.1	glycosyltransferase family 2 protein	-
R8620_RS05745 (B10666_11390)	-	1105905..1107290 (+)	1386	WP_052804524.1	hypothetical protein	-
R8620_RS05750 (B10666_11400)	-	1107292..1108368 (+)	1077	WP_079460666.1	hypothetical protein	-
R8620_RS05755 (B10666_11410)	waaV	1108365..1109180 (-)	816	WP_052804525.1	glycosyltransferase family 2 protein	-
R8620_RS05760 (B10666_11420)	waaF	1109239..1110198 (+)	960	WP_052804526.1	lipopolysaccharide heptosyltransferase II	Regulator
R8620_RS05765 (B10666_11430)	gmhA	1110179..1110739 (-)	561	WP_002855785.1	D-sedoheptulose 7-phosphate isomerase	-
R8620_RS05770 (B10666_11440)	rfaE1	1110736..1112121 (-)	1386	WP_032589937.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
R8620_RS05775 (B10666_11450)	rfaD	1112114..1113067 (-)	954	WP_002856483.1	ADP-glyceromanno-heptose 6-epimerase	-
R8620_RS05780 (B10666_11460)	gmhB	1113069..1113629 (-)	561	WP_052804527.1	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
R8620_RS05785 (B10666_11470)	-	1113711..1114013 (+)	303	WP_052785829.1	c-type cytochrome	-
R8620_RS05790 (B10666_11480)	ccoS	1114017..1114241 (-)	225	WP_020836832.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36745.20 Da
• Isoelectric Point: 10.1676

>NTDB_id=104944 R8620_RS05760 WP_052804526.1 1109239..1110198(+) (waaF) [Campylobacter jejuni strain BCH-10666]
MKIFIHLPTWLGDAVMASPALYAIKEHFKDAQFILYGSLVSTALFKEFPNSKIIIENKQSRYKQALSLRKELGKIDFSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEYQVLKYLYFIENSLDIKAHFKDLKLPFKLKFQNPLILKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHLSAVYKVKTVAIFGPTNFTQTSPWQNENAKLVHLDLACMPCMQKTCPLKHHKCMKDLKPQRVIEEARNLLKNSHL

Nucleotide

• Length: 960 bp

>NTDB_id=104944 R8620_RS05760 WP_052804526.1 1109239..1110198(+) (waaF) [Campylobacter jejuni strain BCH-10666]
ATGAAAATTTTTATACACCTTCCCACTTGGCTAGGCGATGCGGTGATGGCTTCACCTGCTTTATACGCTATAAAAGAACA
CTTTAAAGATGCCCAGTTTATCCTTTATGGCTCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCCAATTCTAAAATCA
TCATAGAAAATAAACAATCCCGCTATAAACAAGCTCTATCTTTACGCAAAGAACTTGGTAAGATCGATTTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTACATATTCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAATATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTGACATAAAAGCTCATTTTAAAGACTTAA
AACTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTATCTTAAAAAATGGCAAAAAAATTCTAGGACTCAACCCTGGCGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTAGCTTTAAATTTCAGCCAAAGTCATGAAATTTT
AATCTTTGGCGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGTCCTATGCACCTAAGTGCGGTTTATAAGGTAAAAACCGTAGCTATTTTTGGCCCCACAAATTTTACCCAAACTTCACC
TTGGCAAAATGAAAACGCAAAATTAGTACATTTAGATCTAGCTTGCATGCCTTGTATGCAAAAAACCTGTCCTTTAAAAC
ACCACAAGTGCATGAAAGATCTAAAGCCTCAAAGGGTTATAGAAGAGGCTAGAAATTTACTTAAAAACTCTCATCTATGA

Domains

Predicted by InterproScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (95-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	95.298	100	0.953