Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | R8620_RS05440 | Genome accession | NZ_AP028369 |
| Coordinates | 1045028..1045330 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain BCH-10666 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1040028..1050330
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R8620_RS05415 (B10666_10730) | rpsR | 1040391..1040651 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| R8620_RS05420 (B10666_10740) | lon | 1040711..1043086 (-) | 2376 | WP_002853487.1 | endopeptidase La | - |
| R8620_RS05425 (B10666_10750) | - | 1043103..1043750 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| R8620_RS05430 (B10666_10760) | fliW | 1043911..1044300 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| R8620_RS05435 (B10666_10770) | proC | 1044300..1045031 (+) | 732 | WP_002854026.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| R8620_RS05440 (B10666_10780) | ctsT | 1045028..1045330 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| R8620_RS05445 (B10666_10790) | - | 1045327..1045989 (+) | 663 | WP_002866103.1 | hypothetical protein | - |
| R8620_RS05450 (B10666_10800) | - | 1045986..1046438 (+) | 453 | WP_002869049.1 | hypothetical protein | - |
| R8620_RS05455 (B10666_10810) | hemD | 1046435..1047064 (-) | 630 | WP_052804498.1 | uroporphyrinogen-III synthase | - |
| R8620_RS05460 (B10666_10820) | thiE | 1047042..1047674 (-) | 633 | WP_052804499.1 | thiamine phosphate synthase | - |
| R8620_RS05465 (B10666_10830) | thiD | 1047664..1048476 (-) | 813 | WP_002873290.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| R8620_RS05470 (B10666_10840) | - | 1048473..1049159 (-) | 687 | WP_052804500.1 | endonuclease III domain-containing protein | - |
| R8620_RS05475 (B10666_10850) | - | 1049156..1049917 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=104942 R8620_RS05440 WP_002853046.1 1045028..1045330(+) (ctsT) [Campylobacter jejuni strain BCH-10666]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=104942 R8620_RS05440 WP_002853046.1 1045028..1045330(+) (ctsT) [Campylobacter jejuni strain BCH-10666]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGTATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGTATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |