Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | R8891_RS05685 | Genome accession | NZ_AP028367 |
| Coordinates | 1098675..1098977 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain BCH-10642 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1093675..1103977
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R8891_RS05660 (B10642_11180) | rpsR | 1094038..1094298 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| R8891_RS05665 (B10642_11190) | lon | 1094358..1096733 (-) | 2376 | WP_317719067.1 | endopeptidase La | - |
| R8891_RS05670 (B10642_11200) | - | 1096750..1097397 (-) | 648 | WP_002860191.1 | outer membrane protein assembly factor BamD | - |
| R8891_RS05675 (B10642_11210) | fliW | 1097558..1097947 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| R8891_RS05680 (B10642_11220) | proC | 1097947..1098678 (+) | 732 | WP_002859150.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| R8891_RS05685 (B10642_11230) | ctsT | 1098675..1098977 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| R8891_RS05690 (B10642_11240) | - | 1098974..1099636 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| R8891_RS05695 (B10642_11250) | - | 1099633..1100085 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| R8891_RS05700 (B10642_11260) | hemD | 1100082..1100711 (-) | 630 | WP_002859147.1 | uroporphyrinogen-III synthase | - |
| R8891_RS05705 (B10642_11270) | thiE | 1100689..1101321 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| R8891_RS05710 (B10642_11280) | thiD | 1101311..1102123 (-) | 813 | WP_002867189.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| R8891_RS05715 (B10642_11290) | - | 1102120..1102806 (-) | 687 | WP_002852847.1 | endonuclease III domain-containing protein | - |
| R8891_RS05720 (B10642_11300) | - | 1102803..1103564 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=104915 R8891_RS05685 WP_002853046.1 1098675..1098977(+) (ctsT) [Campylobacter jejuni strain BCH-10642]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=104915 R8891_RS05685 WP_002853046.1 1098675..1098977(+) (ctsT) [Campylobacter jejuni strain BCH-10642]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |