Detailed information    

insolico Bioinformatically predicted

Overview


Name   mecA   Type   Regulator
Locus tag   AB3U57_RS06410 Genome accession   NZ_CP168976
Coordinates   1221700..1222383 (+) Length   227 a.a.
NCBI ID   WP_000350713.1    Uniprot ID   A0A9W5RA28
Organism   Bacillus cereus strain QKG-2024     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context


Location: 1216700..1227383
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB3U57_RS06390 (AB3U57_06390) - 1217761..1219407 (+) 1647 WP_000728609.1 peptide ABC transporter substrate-binding protein -
  AB3U57_RS06395 (AB3U57_06395) - 1219438..1219641 (-) 204 WP_000559971.1 hypothetical protein -
  AB3U57_RS06400 (AB3U57_06400) spx 1220235..1220630 (+) 396 WP_000258267.1 transcriptional regulator Spx -
  AB3U57_RS06405 (AB3U57_06405) - 1220680..1221354 (-) 675 WP_000362607.1 TerC family protein -
  AB3U57_RS06410 (AB3U57_06410) mecA 1221700..1222383 (+) 684 WP_000350713.1 adaptor protein MecA Regulator
  AB3U57_RS06415 (AB3U57_06415) - 1222456..1224000 (+) 1545 WP_000799194.1 cardiolipin synthase -
  AB3U57_RS06420 (AB3U57_06420) - 1224081..1225325 (+) 1245 WP_065382045.1 competence protein CoiA -
  AB3U57_RS06425 (AB3U57_06425) pepF 1225376..1227202 (+) 1827 WP_065382046.1 oligoendopeptidase F Regulator

Sequence


Protein


Download         Length: 227 a.a.        Molecular weight: 27010.06 Da        Isoelectric Point: 3.9822

>NTDB_id=1049131 AB3U57_RS06410 WP_000350713.1 1221700..1222383(+) (mecA) [Bacillus cereus strain QKG-2024]
MDIERINDHTMKFFITYIDIEDRGFNREEIWYDRERSEELFWEMMDEARDHDDFFIDGPLWIQVQAVDKGIEVLVTKAEL
SKDGQKLELPIGVDKIIDIPLDEGIESLFQQELVEEVEEQTGTNFNEDGTFGFLIKFNDFEDVISLSHRLIFEDIKDELY
SFEDRYYVYVEFDEVLHDEEEIDRILSIILEYGEESTLTIHRVSEYGKQIVKEHALETIRNNFPAKT

Nucleotide


Download         Length: 684 bp        

>NTDB_id=1049131 AB3U57_RS06410 WP_000350713.1 1221700..1222383(+) (mecA) [Bacillus cereus strain QKG-2024]
TTGGATATTGAAAGAATTAATGATCATACGATGAAATTTTTTATTACGTACATTGATATAGAGGATAGAGGATTTAATCG
TGAAGAAATTTGGTATGATCGCGAACGAAGTGAAGAGCTCTTTTGGGAGATGATGGACGAAGCTCGTGATCATGACGATT
TCTTTATTGATGGACCGTTATGGATTCAAGTGCAAGCAGTCGATAAAGGGATTGAAGTACTTGTCACGAAAGCAGAGCTT
TCAAAGGACGGACAAAAGCTGGAACTACCGATAGGGGTAGACAAAATTATAGATATTCCTCTAGATGAAGGCATCGAATC
ATTATTCCAACAAGAATTAGTCGAAGAGGTAGAAGAACAAACAGGAACAAACTTTAATGAAGATGGTACGTTTGGCTTTT
TAATTAAATTTAATGATTTTGAAGATGTCATTTCATTAAGTCATCGTCTTATCTTTGAAGATATAAAAGATGAGCTGTAT
TCATTTGAGGACCGCTATTATGTATATGTGGAATTCGATGAAGTGCTACATGATGAAGAAGAAATCGATCGTATTTTAAG
TATTATTTTAGAATATGGAGAAGAATCAACTTTAACAATTCATCGTGTAAGTGAGTATGGAAAACAAATTGTGAAAGAGC
ATGCGCTTGAAACGATTCGCAATAATTTTCCTGCTAAAACGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

55.702

100

0.559


Multiple sequence alignment