Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   ZY05719_RS04250 Genome accession   NZ_CP007497
Coordinates   858088..858753 (-) Length   221 a.a.
NCBI ID   WP_012775103.1    Uniprot ID   A0A0H3MVW7
Organism   Streptococcus suis strain ZY05719 isolate diseased pig     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 853088..863753
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ZY05719_RS10510 (ZY05719_04240) - 853164..854065 (+) 902 Protein_776 Abi family protein -
  ZY05719_RS04235 (ZY05719_04245) xerS 854426..855496 (+) 1071 WP_012775101.1 tyrosine recombinase XerS Machinery gene
  ZY05719_RS04240 (ZY05719_04250) - 855566..857074 (-) 1509 WP_011922400.1 phosphomannomutase/phosphoglucomutase -
  ZY05719_RS04245 (ZY05719_04255) - 857150..858091 (-) 942 WP_012775102.1 sensor histidine kinase -
  ZY05719_RS04250 (ZY05719_04260) braR 858088..858753 (-) 666 WP_012775103.1 response regulator transcription factor Regulator
  ZY05719_RS04255 (ZY05719_04265) - 858792..859049 (-) 258 WP_011922404.1 type II toxin-antitoxin system RelE family toxin -
  ZY05719_RS04260 (ZY05719_04270) relB 859033..859284 (-) 252 WP_012775104.1 type II toxin-antitoxin system RelB family antitoxin -
  ZY05719_RS04265 (ZY05719_04275) - 859376..861346 (-) 1971 WP_012775105.1 ABC transporter permease -
  ZY05719_RS04270 (ZY05719_04280) - 861347..862099 (-) 753 WP_011922409.1 ABC transporter ATP-binding protein -
  ZY05719_RS04275 (ZY05719_04285) - 862235..862969 (-) 735 WP_011922410.1 ABC transporter permease -
  ZY05719_RS04280 (ZY05719_04290) - 862971..863717 (-) 747 WP_011922411.1 ABC transporter permease -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25460.22 Da        Isoelectric Point: 4.7792

>NTDB_id=104913 ZY05719_RS04250 WP_012775103.1 858088..858753(-) (braR) [Streptococcus suis strain ZY05719 isolate diseased pig]
MKKEKIYIVEDDEMIVQLLKQHLGKSYQVESVQNFRAVSQEVAEIKPDLVLMDINLPYYNGFYWTTEIRKTMTMPIIFIS
SSDDEMNAVMAMNMGGDDFVSKPFSLGILDAKIGAFLRRVNQFSKSSELSIDQFQLSLDGRFSNESEQVQLSPTETKILS
ALLERQGQIVSKDELLEKLWENEEFIDQNTLNVNMTRLRKKVSEVGFERIHTVRGVGYLIK

Nucleotide


Download         Length: 666 bp        

>NTDB_id=104913 ZY05719_RS04250 WP_012775103.1 858088..858753(-) (braR) [Streptococcus suis strain ZY05719 isolate diseased pig]
ATGAAAAAAGAGAAGATTTATATTGTTGAAGATGATGAGATGATTGTCCAACTCTTGAAGCAGCATTTGGGAAAATCTTA
TCAGGTAGAAAGTGTGCAGAATTTCCGAGCTGTCAGTCAGGAAGTTGCGGAAATCAAACCAGACTTAGTGCTGATGGACA
TTAACTTGCCCTATTACAACGGTTTTTATTGGACGACAGAAATCCGTAAAACCATGACCATGCCCATTATCTTTATCTCT
TCTAGCGATGATGAGATGAATGCGGTCATGGCCATGAACATGGGTGGCGATGATTTTGTCTCCAAGCCATTTTCTCTAGG
AATTTTGGATGCCAAAATCGGAGCCTTCCTGCGTCGGGTTAATCAATTCAGCAAATCGAGCGAATTGTCTATCGATCAGT
TCCAGCTTAGTTTGGACGGGCGATTTTCAAACGAATCGGAACAGGTTCAGCTTTCACCTACTGAAACCAAGATTTTATCC
GCCTTACTAGAAAGACAAGGGCAGATTGTCAGCAAGGATGAACTCTTGGAAAAACTCTGGGAAAATGAAGAATTTATCGA
CCAGAATACGCTCAATGTAAACATGACCAGACTGCGTAAGAAGGTGAGCGAAGTCGGGTTTGAACGAATTCATACCGTTC
GTGGCGTGGGGTACTTGATCAAATGA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-219)

Response regulator receiver domain (Response_reg)

(6-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H3MVW7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

47.248

98.643

0.466