Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   ACEQ85_RS11330 Genome accession   NZ_CP168966
Coordinates   2359385..2363914 (+) Length   1509 a.a.
NCBI ID   WP_373882618.1    Uniprot ID   -
Organism   Acinetobacter pittii strain LS-AP     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 2354385..2368914
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACEQ85_RS11305 (ACEQ85_11305) - 2354824..2355462 (-) 639 WP_069124015.1 hypothetical protein -
  ACEQ85_RS11310 (ACEQ85_11310) pilG 2355747..2356130 (+) 384 WP_000389061.1 twitching motility response regulator PilG Regulator
  ACEQ85_RS11315 (ACEQ85_11315) pilH 2356154..2356516 (+) 363 WP_046811934.1 PleD family two-component system response regulator -
  ACEQ85_RS11320 (ACEQ85_11320) pilI 2356573..2357109 (+) 537 WP_069124013.1 chemotaxis protein CheW -
  ACEQ85_RS11325 (ACEQ85_11325) - 2357156..2359237 (+) 2082 WP_068565018.1 methyl-accepting chemotaxis protein -
  ACEQ85_RS11330 (ACEQ85_11330) chpA 2359385..2363914 (+) 4530 WP_373882618.1 Hpt domain-containing protein Regulator
  ACEQ85_RS11335 (ACEQ85_11335) - 2363911..2364378 (+) 468 WP_199113899.1 hypothetical protein -
  ACEQ85_RS11340 (ACEQ85_11340) - 2364687..2365568 (+) 882 WP_373882619.1 alpha/beta fold hydrolase -
  ACEQ85_RS11345 (ACEQ85_11345) dapE 2365703..2366839 (-) 1137 WP_373882620.1 succinyl-diaminopimelate desuccinylase -
  ACEQ85_RS11350 (ACEQ85_11350) - 2366966..2367109 (-) 144 WP_014207555.1 entericidin A/B family lipoprotein -
  ACEQ85_RS11355 (ACEQ85_11355) - 2367233..2368114 (-) 882 WP_017385890.1 DUF1853 family protein -
  ACEQ85_RS11360 (ACEQ85_11360) - 2368218..2368586 (+) 369 WP_017385889.1 YbaN family protein -

Sequence


Protein


Download         Length: 1509 a.a.        Molecular weight: 172252.03 Da        Isoelectric Point: 4.3334

>NTDB_id=1048998 ACEQ85_RS11330 WP_373882618.1 2359385..2363914(+) (chpA) [Acinetobacter pittii strain LS-AP]
MKEILKTLTEAMMLPEDSYSEQDAEFLEIFVEEIEEIFVDLQPLLNEWMRSENTATLTEIRRHFHTLKGSGRMIGAKSSA
ELAWTVEDTLNRVINQSLKLTPAIQSYVQLVFKFYFLKLVDNFKQKRAHAVDFRPLILLGQQLQQQQSLEPALEELLQLS
NTLTAETITGLELDYLEQDSLAESIVEDVHTEIEINLNETLALFMEEAEEHLSTINQFLNQELHQYDSYNALIRALHTLR
GSSAMAQVETIFEASTKVEQLFKILLQEELSSNSDEILLLQEYRDFIGESLELLSSNSSSEQLEVRLEQFNQSWDVYVEE
HSDRTDPLMPSHGLVSQLLLLDVSELLDAELDFEKGIRNEFPGYLERLSEQADLLLQHTHSQAMLGLHEYTSQLKDSYNV
LLDKPVLLQSDYIFEIYQKAHQQLIQLFDALAAGQRVGIVKQHQSILEELKLYTLHTPSIQNDVSQQNFTFDESLFNIEL
ESEVPEVIRVENLSDSADWTLLSQSVQQDRQYISSTQVNQNFDPDLLDIFLEEADELLEGMDTDLNIWINDQENFAALNN
LMRYLHTLKGGANMIQAIYIGLIAHELESIYERLIQRQLIASSALIDFIRLVQDDLADRLQIMREKQLDYEAYYTINALK
RACQNSNFQSAPEIEVSDIEREIFSEQEVISEVLIDEVPAEIEAVIEELEAHHDQVFDTVVTELAAPVEAITSVVSSHEN
DALVDEEDITAVVEQTFLEEAAELLEMADMLLKQWFDQRTNRSILLQLQRAVHSLKGGARMVGLEAVYAIAYQLENAFEQ
FALHHFNSNIYDHLLESAIAWLKDAIFKYNYQHFDGLQQSLENIQFFETNIQIPAKLSKADLFSSEPVMTFIQGDGTEPP
PMMGAWEQTQRLDQNNEMIRVSADLIEKMIDLSGENSINRSRIEMDLSQFGHTLAEMELAIQRLADQLRRMEGELETQII
AKHGIEHSRYTEFDPLEMDRYSSLNQLSKSLAESASDLVDFKNTLSDKIRDTESLLLQQSRIQAEIQEGLMRTRLVPFSR
LLPRLQRIVRQTSTALNRPAELFVNNTEGELDRNILERLVTPLEHMLRNAIDHGLEDRVQRQQAQKPETGRIELNIHRQG
TDVVVTFKDDGRGIDIEKVRQKALMFGLINPEQVLEHQDILQLIFHPGLSTADQVTQISGRGVGLDVVQSDIKALGGHVS
VESVYGQGTVFTIRVPTTVAVSDALMVKVADQQFAIPLAQIDRIVRVSPASLEQYFGSVQEFFEFENKRYPLRYLSEFVG
SQPIPRLSGMMYSLPVLMIKANNGQTVALLVDQLIGSRAQIVVKPIGQQFSSIGAIAGATILGDGQVCLILDGQNIARQI
QSTRRLKLVNEAVYRQRESDERRLIMIVDDSVTVRKVTSRLLERQGYDVVTAKDGVDAIEQLENIKPDLMLLDIEMPRMD
GFEVLNLVRHHDMHQYMPIIMITSRTGEKHRERAFSLGVSQYMGKPFQEEELLENIDALLVAFESEVKS

Nucleotide


Download         Length: 4530 bp        

>NTDB_id=1048998 ACEQ85_RS11330 WP_373882618.1 2359385..2363914(+) (chpA) [Acinetobacter pittii strain LS-AP]
ATGAAAGAAATATTAAAAACTTTAACTGAAGCAATGATGCTACCTGAAGATAGCTATTCTGAACAAGATGCTGAGTTTCT
TGAGATTTTCGTCGAAGAAATTGAAGAAATTTTTGTTGATTTGCAACCATTGCTAAATGAATGGATGCGGTCTGAGAATA
CTGCTACGCTCACTGAAATTCGCCGCCATTTCCATACCTTAAAAGGTTCTGGGAGGATGATTGGTGCTAAATCTTCAGCT
GAGCTTGCTTGGACAGTTGAAGACACGCTCAATCGAGTAATCAATCAAAGCCTTAAGTTGACTCCAGCTATCCAGAGTTA
TGTTCAGTTAGTGTTTAAGTTCTATTTCCTTAAATTAGTAGATAACTTTAAGCAAAAAAGAGCACATGCAGTAGATTTTA
GACCGCTTATTTTATTGGGACAACAATTACAACAACAGCAAAGTTTAGAACCTGCTTTAGAAGAGCTTTTACAACTTTCA
AATACGCTTACTGCCGAAACAATAACTGGACTTGAGCTAGACTATCTTGAGCAAGATTCATTGGCTGAGTCAATTGTTGA
AGATGTACATACTGAAATTGAAATAAATCTAAATGAAACCTTAGCCTTATTTATGGAAGAAGCGGAGGAGCATTTATCGA
CAATTAATCAGTTCTTAAATCAAGAGCTACATCAGTATGATAGTTACAATGCTTTAATACGTGCTCTACATACTTTGCGT
GGCAGTTCTGCAATGGCGCAGGTCGAAACAATTTTTGAAGCCAGTACCAAAGTTGAGCAGTTATTTAAAATCTTATTACA
AGAAGAACTTTCTTCTAATTCAGATGAGATTTTATTATTACAAGAATATCGCGATTTTATTGGAGAGAGCTTAGAGCTGC
TATCTAGCAATAGTTCAAGTGAACAGCTTGAAGTGAGATTAGAGCAGTTTAATCAATCATGGGATGTCTACGTTGAGGAG
CATAGTGATCGAACAGATCCATTAATGCCTTCACATGGTTTGGTATCGCAATTATTACTGTTAGATGTTTCTGAGCTACT
CGATGCAGAATTAGATTTTGAGAAAGGAATTCGTAACGAGTTTCCTGGTTATCTTGAACGTCTAAGTGAACAGGCTGATT
TGTTGCTACAGCATACCCACTCTCAAGCAATGCTAGGTTTACATGAATATACGAGCCAATTGAAAGACAGCTATAATGTA
TTGCTTGATAAACCTGTGTTATTGCAATCGGACTATATTTTTGAAATTTATCAAAAAGCGCATCAACAACTTATTCAATT
GTTCGATGCTTTAGCTGCTGGTCAGCGAGTCGGTATTGTTAAGCAACATCAAAGTATTCTAGAAGAATTAAAACTTTATA
CGCTACATACACCTAGTATTCAAAATGATGTATCTCAGCAGAATTTTACTTTTGATGAGTCACTATTCAATATTGAACTA
GAGTCTGAAGTTCCAGAAGTTATTAGAGTAGAGAATTTATCAGACTCTGCTGACTGGACCCTATTAAGCCAAAGTGTACA
GCAAGATCGTCAATATATTTCCTCTACACAGGTAAATCAAAACTTTGATCCAGATCTATTAGACATTTTCCTCGAAGAAG
CTGATGAGTTGCTTGAAGGAATGGATACAGATCTTAATATTTGGATTAATGATCAAGAGAACTTTGCGGCTCTCAATAAT
TTGATGCGTTATTTGCACACCTTAAAAGGTGGAGCAAATATGATCCAAGCAATTTATATTGGCTTAATTGCACATGAATT
GGAAAGTATTTATGAGCGATTAATTCAAAGACAGCTAATTGCTTCATCTGCTCTCATTGATTTTATACGTCTGGTTCAAG
ATGACTTGGCTGACCGTCTACAAATCATGCGTGAAAAACAGCTAGATTATGAAGCTTATTACACAATTAACGCATTGAAA
AGAGCATGTCAAAACTCTAACTTCCAATCTGCACCTGAGATTGAAGTATCTGATATTGAACGTGAGATATTCTCTGAACA
AGAGGTGATATCTGAAGTATTAATAGATGAAGTACCGGCAGAAATTGAAGCTGTTATTGAAGAATTAGAAGCTCATCATG
ATCAAGTATTTGATACAGTTGTTACTGAATTGGCTGCGCCAGTTGAAGCAATAACATCAGTTGTATCGTCGCACGAGAAT
GACGCTCTGGTTGATGAAGAGGACATTACTGCTGTTGTTGAGCAGACATTCCTCGAAGAAGCTGCTGAATTGTTAGAAAT
GGCTGATATGCTATTGAAACAATGGTTTGATCAGCGTACGAATCGTAGTATCTTGCTTCAATTACAAAGGGCCGTGCACA
GCTTGAAGGGTGGTGCACGAATGGTTGGTTTAGAAGCCGTGTATGCGATTGCCTATCAACTTGAGAATGCTTTTGAACAA
TTTGCACTACATCACTTCAACTCGAATATTTATGACCATTTGCTCGAAAGTGCAATTGCATGGCTAAAAGACGCAATTTT
CAAGTACAACTACCAGCATTTTGATGGACTACAACAAAGTTTAGAAAATATTCAATTCTTTGAAACGAATATCCAAATTC
CAGCTAAGTTAAGTAAAGCTGATTTGTTTAGCTCAGAACCCGTGATGACCTTTATACAAGGTGATGGTACAGAACCACCG
CCAATGATGGGAGCATGGGAACAAACTCAACGGCTTGATCAAAATAATGAGATGATCCGAGTTTCGGCAGATTTAATTGA
AAAAATGATTGATCTGTCAGGTGAAAATTCGATTAACCGTTCGCGAATTGAAATGGATTTAAGCCAATTTGGACATACGC
TAGCGGAAATGGAATTGGCCATTCAGCGACTTGCAGATCAGTTGCGTCGAATGGAAGGTGAATTGGAAACCCAAATTATT
GCAAAACACGGTATTGAGCACTCTCGATATACGGAGTTTGATCCGTTAGAGATGGATCGATATTCGTCTTTAAATCAATT
ATCAAAATCTCTTGCTGAATCTGCATCGGATTTGGTCGACTTTAAAAATACATTATCTGACAAAATCAGAGATACAGAAA
GCTTACTTTTACAACAGTCACGGATTCAAGCAGAAATTCAAGAAGGTTTGATGCGAACGCGATTAGTACCTTTCTCTCGA
TTACTGCCGCGTTTACAGCGAATTGTCCGTCAGACATCTACAGCTTTGAACAGACCTGCAGAGCTTTTTGTAAATAATAC
CGAAGGTGAGTTAGATCGCAATATTTTAGAACGGTTAGTGACCCCGCTTGAGCATATGCTCAGAAATGCAATTGACCATG
GTCTAGAAGATCGCGTGCAACGTCAACAAGCACAAAAACCAGAAACTGGACGTATTGAACTTAATATCCATCGTCAAGGT
ACAGATGTTGTTGTGACATTTAAGGATGATGGAAGAGGTATTGATATCGAAAAGGTTCGTCAAAAGGCATTGATGTTTGG
TTTAATTAATCCTGAACAAGTATTGGAACATCAAGATATTTTACAGTTGATTTTCCATCCGGGTTTAAGTACAGCTGATC
AAGTTACTCAAATTTCAGGTCGTGGTGTAGGACTGGATGTAGTACAAAGTGATATTAAGGCTCTAGGTGGCCATGTGAGC
GTAGAGTCTGTGTATGGGCAGGGAACGGTCTTTACAATACGTGTTCCAACTACAGTAGCGGTTAGTGATGCCTTAATGGT
TAAAGTTGCTGATCAGCAATTTGCAATCCCTCTGGCCCAAATTGATCGAATTGTACGAGTTTCACCTGCATCATTAGAAC
AATATTTTGGAAGCGTACAAGAATTCTTTGAATTTGAAAATAAACGCTATCCATTGCGCTATTTATCTGAATTTGTTGGT
AGTCAACCAATTCCGCGTTTAAGTGGAATGATGTATTCATTACCAGTATTAATGATTAAGGCAAATAATGGCCAAACTGT
CGCATTATTAGTTGACCAACTGATTGGATCACGTGCACAGATTGTAGTCAAACCAATTGGGCAGCAGTTCTCTAGTATCG
GTGCGATTGCAGGAGCAACTATTTTAGGTGATGGTCAAGTTTGCTTAATTTTAGATGGTCAAAATATTGCTCGCCAAATT
CAGTCTACTCGTCGACTTAAGCTGGTTAATGAAGCGGTTTATAGACAACGAGAGTCTGATGAGCGACGTCTCATCATGAT
TGTGGATGACTCAGTAACTGTGCGTAAAGTAACCTCTCGTTTACTCGAGCGCCAAGGCTATGATGTTGTGACCGCTAAAG
ATGGTGTGGATGCTATAGAGCAGCTAGAAAACATTAAGCCAGATCTGATGCTGCTTGATATTGAAATGCCACGCATGGAT
GGTTTTGAAGTTCTTAATCTTGTACGACATCATGATATGCATCAATACATGCCAATTATTATGATTACATCCCGAACAGG
TGAAAAACATCGTGAACGAGCATTCTCATTAGGTGTAAGTCAATATATGGGTAAACCTTTCCAAGAGGAAGAGTTATTAG
AGAATATCGATGCTTTACTTGTGGCGTTTGAAAGTGAGGTCAAATCATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

89.132

100

0.891


Multiple sequence alignment