Detailed information    

insolico Bioinformatically predicted

Overview

Name   priA   Type   Machinery gene
Locus tag   ACEQ85_RS06030 Genome accession   NZ_CP168966
Coordinates   1269078..1271306 (+) Length   742 a.a.
NCBI ID   WP_373883519.1    Uniprot ID   -
Organism   Acinetobacter pittii strain LS-AP     
Function   DNA puliing through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1264078..1276306
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACEQ85_RS06005 (ACEQ85_06005) lnt 1264529..1266088 (+) 1560 WP_068612566.1 apolipoprotein N-acyltransferase -
  ACEQ85_RS06010 (ACEQ85_06010) csaA 1266090..1266428 (-) 339 WP_068612568.1 tRNA-binding protein -
  ACEQ85_RS06015 (ACEQ85_06015) - 1266574..1266918 (-) 345 WP_005079286.1 hypothetical protein -
  ACEQ85_RS06020 (ACEQ85_06020) gspG 1267185..1267700 (-) 516 WP_373883740.1 type II secretion system major pseudopilin GspG -
  ACEQ85_RS06025 (ACEQ85_06025) gspF 1267724..1268929 (-) 1206 WP_373883518.1 type II secretion system inner membrane protein GspF -
  ACEQ85_RS06030 (ACEQ85_06030) priA 1269078..1271306 (+) 2229 WP_373883519.1 primosomal protein N' Machinery gene
  ACEQ85_RS06035 (ACEQ85_06035) kefB 1271383..1273227 (+) 1845 WP_373883520.1 monovalent cation:proton antiporter-2 (CPA2) family protein -
  ACEQ85_RS06040 (ACEQ85_06040) hslO 1273391..1274266 (+) 876 WP_373883521.1 Hsp33 family molecular chaperone HslO -
  ACEQ85_RS06045 (ACEQ85_06045) - 1274404..1275015 (+) 612 WP_002115157.1 LysE family translocator -
  ACEQ85_RS06050 (ACEQ85_06050) cbpA 1275150..1276106 (+) 957 WP_373883522.1 DnaJ C-terminal domain-containing protein -

Sequence

Protein


Download         Length: 742 a.a.        Molecular weight: 84041.80 Da        Isoelectric Point: 8.5557

>NTDB_id=1048974 ACEQ85_RS06030 WP_373883519.1 1269078..1271306(+) (priA) [Acinetobacter pittii strain LS-AP]
MTITPKPDSVVYRVRVAVPVHLYDTFDYTLTQAQYERAHVGSRVAISFGRQNLIGIITEKVDPSESFTGTFQLKAISDLL
DEQPILDEQVLSLLTWSAQYYQFPIGEVMQTALPALLRQGKPMDVLFHLWKITPCDNVEALLKRSVKQQDAYQILKLHPA
GTTENILNLSGVETATLKALQKKGLVDCTLEPHDFSPSPVQLAQMPLTLNEDQKKATQHVVNAQHQYQAFLLDGLTGSGK
TEVYLHIMHEVLKQGKQVLVLVPEIGLTPQTISRFKSRFNCDIALLHSGLNDSKRLQAWQQAQTGKASIILGTRSAIYTP
LPRLGLIILDEEHDLSYKQQEGFRYHARDVALYRGHLQNCPVILGSATPSIDSYYLVETGKLTSLQLNQRAGHALLPKMH
LIDLKIVKKQHGISQPLIEQIKNTLARKEQVLIFLNRRGYAPVLVCESCGWQANCPHCDAHFTLHTQPYSYLHCHHCGTV
HRLPDHCPECQQKSLKTLGAGTAKVEEHLQELFPDYDVIRVDRDSTSRVGSWQKIYDRIHQNKPTILLGTQMLAKGHHFP
HVTLVAILDIDAGLLSVDIRAPERTAQLIVQVAGRAGRGEHKGHVYLQTLRPDHPLLTTLIEKDYRAVAKQTLAERKVAL
LPPYRYAVLIRAESKDRDYTLQFLNEAAEQLRQVAGEIIDIWGPIPAPMERKAGRYRAHMVILSADRARLHFYLRQWWSQ
LVHAPRQYQLRLSIDVDPQEFN

Nucleotide


Download         Length: 2229 bp        

>NTDB_id=1048974 ACEQ85_RS06030 WP_373883519.1 1269078..1271306(+) (priA) [Acinetobacter pittii strain LS-AP]
ATGACCATAACGCCAAAGCCTGATTCAGTTGTTTATCGTGTGCGTGTAGCCGTACCTGTGCATCTGTACGACACTTTTGA
CTATACACTCACCCAAGCACAATATGAACGGGCTCATGTAGGCTCACGCGTCGCTATTTCATTTGGGCGCCAAAACCTGA
TTGGCATCATTACTGAAAAAGTTGATCCAAGTGAATCATTTACAGGCACCTTTCAGCTTAAAGCCATTTCTGACCTTTTA
GACGAACAGCCTATTTTAGATGAACAAGTTTTAAGTTTATTGACATGGTCAGCTCAGTATTACCAATTTCCAATTGGCGA
GGTCATGCAAACCGCCCTACCTGCATTATTGCGTCAAGGCAAACCAATGGATGTTTTGTTCCATCTTTGGAAAATTACAC
CATGTGATAATGTTGAAGCACTTCTTAAACGTTCTGTTAAGCAACAAGACGCGTATCAAATTTTAAAGTTACATCCTGCT
GGAACTACAGAGAATATTCTTAATTTAAGTGGTGTAGAAACAGCTACGCTTAAAGCACTGCAAAAGAAAGGACTGGTTGA
CTGTACGCTTGAACCACACGATTTTAGCCCATCGCCTGTTCAATTGGCACAAATGCCGCTCACGCTAAATGAAGACCAAA
AGAAAGCAACTCAGCATGTCGTAAACGCACAGCATCAATATCAAGCCTTTTTATTAGATGGTTTAACAGGAAGTGGTAAA
ACTGAAGTTTATCTGCACATCATGCACGAAGTGCTAAAGCAAGGTAAACAAGTACTGGTGTTAGTCCCTGAAATTGGTCT
AACCCCTCAAACGATTTCTCGTTTTAAATCGCGTTTTAACTGTGATATTGCTCTATTACACTCTGGCTTAAATGACTCCA
AACGCTTGCAGGCATGGCAACAGGCTCAGACGGGCAAAGCATCTATTATTTTAGGAACACGCTCAGCCATTTATACGCCG
CTGCCACGTTTGGGCTTAATCATTTTAGATGAAGAGCATGACCTCTCTTATAAACAGCAAGAAGGCTTCCGGTACCATGC
ACGTGATGTCGCACTTTATCGAGGGCACTTGCAAAACTGCCCTGTTATTTTAGGTTCAGCAACACCGAGCATCGATAGTT
ATTATTTGGTCGAAACTGGTAAATTAACTTCACTGCAACTTAATCAACGTGCAGGCCATGCGCTTTTACCTAAAATGCAT
TTGATTGACCTTAAAATTGTCAAAAAACAGCATGGAATTAGCCAGCCTTTAATCGAACAGATTAAAAATACCCTAGCTAG
AAAAGAACAGGTTTTAATCTTTTTAAACCGTCGTGGCTATGCACCTGTACTGGTCTGTGAAAGTTGTGGATGGCAAGCAA
ATTGTCCGCATTGTGATGCGCATTTTACGTTGCACACTCAGCCTTATTCTTATTTACACTGCCACCACTGCGGTACTGTT
CATCGCTTGCCAGACCATTGCCCTGAATGCCAGCAAAAAAGCTTAAAAACCTTAGGGGCAGGAACTGCCAAGGTTGAAGA
GCACTTACAAGAACTATTTCCAGACTATGATGTGATTCGGGTTGACCGTGACAGCACCAGTCGTGTCGGTAGCTGGCAAA
AAATCTATGATCGTATTCATCAAAACAAACCAACAATTTTGCTTGGCACTCAAATGCTGGCAAAAGGTCATCATTTCCCA
CACGTGACTTTGGTTGCCATTTTAGATATTGATGCGGGGTTACTTAGTGTCGACATTCGTGCGCCAGAACGTACTGCACA
GTTAATTGTACAAGTCGCGGGTCGTGCAGGTCGTGGTGAACATAAAGGCCATGTTTATTTACAAACCCTAAGACCAGATC
ACCCTTTACTCACCACACTCATCGAAAAAGATTATCGCGCGGTTGCCAAACAAACGCTGGCTGAACGTAAAGTAGCTTTG
CTGCCACCTTATCGCTATGCAGTACTAATACGTGCAGAGTCCAAAGATCGTGACTATACCTTACAATTTTTAAATGAAGC
TGCCGAGCAACTTCGTCAAGTCGCTGGTGAGATTATTGATATTTGGGGACCTATTCCAGCGCCGATGGAACGTAAAGCGG
GACGCTACCGTGCCCACATGGTAATTTTATCTGCCGACCGTGCTCGCCTACATTTTTACTTAAGACAATGGTGGTCTCAA
TTGGTTCATGCTCCAAGACAGTATCAGCTCAGGCTATCAATTGATGTCGATCCGCAAGAATTTAATTAG

Domains

Predicted by InterproScan.

Primosomal protein N C-terminal domain (PriA_C)

(643-738)

Type III restriction enzyme, res subunit (ResIII)

(208-370)

3DNA-binding domain (3BD) (PriA_3primeBD)

(15-114)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  priA Acinetobacter baumannii D1279779

97.844

100

0.978

Multiple sequence alignment