Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | R8954_RS05855 | Genome accession | NZ_AP028365 |
| Coordinates | 1094100..1094402 (+) | Length | 100 a.a. |
| NCBI ID | WP_317725950.1 | Uniprot ID | - |
| Organism | Campylobacter jejuni strain BCH-10632 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1089100..1099402
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R8954_RS05830 (B10632_11410) | rpsR | 1089465..1089725 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| R8954_RS05835 (B10632_11420) | lon | 1089785..1092160 (-) | 2376 | WP_002852988.1 | endopeptidase La | - |
| R8954_RS05840 (B10632_11430) | - | 1092177..1092824 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| R8954_RS05845 (B10632_11440) | fliW | 1092983..1093372 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| R8954_RS05850 (B10632_11450) | proC | 1093372..1094103 (+) | 732 | WP_002859150.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| R8954_RS05855 (B10632_11460) | ctsT | 1094100..1094402 (+) | 303 | WP_317725950.1 | hypothetical protein | Machinery gene |
| R8954_RS05860 (B10632_11470) | - | 1094399..1095061 (+) | 663 | WP_002859149.1 | hypothetical protein | - |
| R8954_RS05865 (B10632_11480) | - | 1095058..1095510 (+) | 453 | WP_002874062.1 | hypothetical protein | - |
| R8954_RS05870 (B10632_11490) | hemD | 1095507..1096136 (-) | 630 | WP_002859147.1 | uroporphyrinogen-III synthase | - |
| R8954_RS05875 (B10632_11500) | thiE | 1096114..1096746 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| R8954_RS05880 (B10632_11510) | thiD | 1096736..1097548 (-) | 813 | WP_032586361.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| R8954_RS05885 (B10632_11520) | - | 1097545..1098231 (-) | 687 | WP_032586318.1 | endonuclease III domain-containing protein | - |
| R8954_RS05890 (B10632_11530) | - | 1098228..1098989 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12148.24 Da Isoelectric Point: 6.2957
>NTDB_id=104888 R8954_RS05855 WP_317725950.1 1094100..1094402(+) (ctsT) [Campylobacter jejuni strain BCH-10632]
MKKAFILIESISAITIVSLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIVSLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=104888 R8954_RS05855 WP_317725950.1 1094100..1094402(+) (ctsT) [Campylobacter jejuni strain BCH-10632]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCGTATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGACGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCGTATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGACGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
98 |
100 |
0.98 |