Detailed information    

insolico Bioinformatically predicted

Overview


Name   sxy/tfoX   Type   Regulator
Locus tag   ACERHU_RS14305 Genome accession   NZ_CP168929
Coordinates   2890072..2890677 (-) Length   201 a.a.
NCBI ID   WP_001202375.1    Uniprot ID   A0A5I0N148
Organism   Salmonella enterica strain SA136     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context


Location: 2885072..2895677
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACERHU_RS14290 (ACERHU_14290) helD 2885289..2887343 (-) 2055 WP_058107044.1 DNA helicase IV -
  ACERHU_RS14295 (ACERHU_14295) - 2887467..2887913 (+) 447 WP_001617378.1 YccF domain-containing protein -
  ACERHU_RS14300 (ACERHU_14300) yccS 2887932..2890085 (+) 2154 WP_000950876.1 YccS family putative transporter -
  ACERHU_RS14305 (ACERHU_14305) sxy/tfoX 2890072..2890677 (-) 606 WP_001202375.1 TfoX/Sxy family DNA transformation protein Regulator
  ACERHU_RS14310 (ACERHU_14310) sulA 2890894..2891403 (+) 510 WP_000288732.1 SOS-induced cell division inhibitor SulA -
  ACERHU_RS14315 (ACERHU_14315) ompA 2891760..2892812 (+) 1053 WP_001670727.1 porin OmpA -
  ACERHU_RS14320 (ACERHU_14320) matP 2892884..2893336 (-) 453 WP_000877172.1 macrodomain Ter protein MatP -
  ACERHU_RS14325 (ACERHU_14325) - 2893522..2895282 (+) 1761 WP_000156459.1 Lon protease family protein -

Sequence


Protein


Download         Length: 201 a.a.        Molecular weight: 23174.94 Da        Isoelectric Point: 8.7403

>NTDB_id=1048795 ACERHU_RS14305 WP_001202375.1 2890072..2890677(-) (sxy/tfoX) [Salmonella enterica strain SA136]
MRALSYDRIYKSQEYLASLGTIQYRSLFGSYSLTVEDTVFAMVANGELYLRACEESVPYCVKHPPAWLMFMKCGRPVMLN
YYRVDESLWRDQQQLVRLSKYSLDAAMKEKHSRILQHRLKDLPNMTFHLETLLNESGIKDENMLRILGAKMCWLRLRQSN
PLLTVKVLYALEGAIVGVHEAALPASRRQELADWAHSLTAG

Nucleotide


Download         Length: 606 bp        

>NTDB_id=1048795 ACERHU_RS14305 WP_001202375.1 2890072..2890677(-) (sxy/tfoX) [Salmonella enterica strain SA136]
ATGAGAGCACTCTCTTATGACAGGATCTATAAATCGCAAGAATATTTGGCCTCTTTGGGGACGATCCAGTATCGATCTTT
ATTCGGTAGCTATAGTCTGACCGTGGAGGATACCGTCTTTGCGATGGTGGCTAATGGCGAGCTTTATCTCCGCGCCTGTG
AAGAAAGCGTACCCTACTGTGTGAAGCATCCTCCCGCCTGGCTCATGTTTATGAAGTGTGGACGTCCCGTTATGCTCAAC
TATTACCGGGTGGATGAAAGCCTGTGGCGCGATCAGCAGCAGCTGGTGCGTTTATCGAAGTATTCTCTTGACGCGGCAAT
GAAGGAAAAACACAGCCGTATTTTACAGCACAGACTCAAAGATCTCCCCAATATGACCTTCCATCTGGAAACATTGCTCA
ATGAGTCAGGGATAAAGGACGAAAATATGTTACGCATACTGGGCGCGAAAATGTGCTGGCTAAGGTTGCGACAAAGCAAT
CCCTTGCTGACGGTGAAAGTTTTGTATGCCCTGGAAGGCGCAATTGTCGGCGTACATGAAGCGGCGCTCCCGGCGAGTCG
TCGCCAGGAGCTTGCCGACTGGGCTCATTCGCTTACGGCTGGGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A5I0N148

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

75.879

99.005

0.751


Multiple sequence alignment