Detailed information NTG0104861

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: R8945_RS06035
• Genome accession: NZ_AP028363
• Coordinates: 1166418..1167377 (+)
• Length: 319 a.a.
• NCBI ID: WP_002876195.1
• Uniprot ID: -
• Organism: Campylobacter jejuni strain BCH-10617
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1161418..1172377

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R8945_RS06010 (B10617_11940)	-	1161754..1162533 (-)	780	WP_002902667.1	glycosyltransferase family 25 protein	-
R8945_RS06015 (B10617_11950)	-	1162530..1163462 (-)	933	WP_052788764.1	glycosyltransferase family 2 protein	-
R8945_RS06020 (B10617_11960)	-	1163455..1164345 (-)	891	WP_002901180.1	glycosyltransferase	-
R8945_RS06025 (B10617_11970)	-	1164357..1165499 (-)	1143	WP_052788765.1	glycosyltransferase family 8 protein	-
R8945_RS06030 (B10617_11980)	waaV	1165550..1166359 (-)	810	WP_002901182.1	glycosyltransferase family 2 protein	-
R8945_RS06035 (B10617_11990)	waaF	1166418..1167377 (+)	960	WP_002876195.1	lipopolysaccharide heptosyltransferase II	Regulator
R8945_RS06040 (B10617_12000)	gmhA	1167358..1167918 (-)	561	WP_002876196.1	D-sedoheptulose 7-phosphate isomerase	-
R8945_RS06045 (B10617_12010)	rfaE1	1167915..1169300 (-)	1386	WP_002901184.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
R8945_RS06050 (B10617_12020)	rfaD	1169293..1170246 (-)	954	WP_002860242.1	ADP-glyceromanno-heptose 6-epimerase	-
R8945_RS06055 (B10617_12030)	gmhB	1170247..1170808 (-)	562	Protein_1173	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
R8945_RS06060 (B10617_12040)	-	1170889..1171191 (+)	303	WP_002852762.1	c-type cytochrome	-
R8945_RS06065 (B10617_12050)	ccoS	1171214..1171420 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36607.08 Da
• Isoelectric Point: 10.2870

>NTDB_id=104861 R8945_RS06035 WP_002876195.1 1166418..1167377(+) (waaF) [Campylobacter jejuni strain BCH-10617]
MKIFIHLPTWLGDAVMASPALYAIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKQSRYKQALSLRKELGKIDLSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLSIKAHSKDLKLPFKLKLQDPLVLKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKSEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHISAVYKVKTVAIFGPTKFTQTSPWQNENAILVHLDLACMPCMQKTCPLKHHKCMKDLKPQRVIEEARNLLKNSHR

Nucleotide

• Length: 960 bp

>NTDB_id=104861 R8945_RS06035 WP_002876195.1 1166418..1167377(+) (waaF) [Campylobacter jejuni strain BCH-10617]
ATGAAAATTTTTATACATCTTCCCACTTGGCTGGGCGATGCAGTGATGGCTTCACCTGCTTTATACGCTATAAAAGAACA
TTTTAAAAATGCCCAATTTATCCTTTATGGCTCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAATCTCGCTATAAACAAGCCCTATCTTTACGCAAAGAACTTGGTAAGATCGATCTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTGCATATCCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTAGTATAAAAGCTCATTCTAAAGACTTAA
AGCTTCCCTTTAAGCTAAAACTTCAAGACCCTCTTGTCTTAAAAAATGGTAAAAAAATTCTAGGACTCAATCCTGGCGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAAATTTT
AATCTTTGGCGCAGGAAAATCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAACAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGTCCTATGCACATAAGTGCGGTTTATAAGGTAAAAACCGTAGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATGAAAACGCAATATTAGTGCATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATCTAAAGCCTCAAAGGGTTATAGAAGAGGCTAGAAATTTACTTAAAAACTCTCATCGATGA

Domains

Predicted by InterproScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (94-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	94.025	99.687	0.937