Detailed information NTG1048522

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ABGU70_RS22700
• Genome accession: NZ_OZ038769
• Coordinates: 4696934..4697959 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644908.1
• Uniprot ID: -
• Organism: Escherichia coli isolate 30348_2#44
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4691934..4702959

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABGU70_RS22680	metJ	4693119..4693436 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
ABGU70_RS22685	yiiX	4693496..4694104 (+)	609	WP_000702314.1	YiiX family permuted papain-like enzyme	-
ABGU70_RS22690	rpmE	4694165..4694377 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
ABGU70_RS22695	priA	4694580..4696778 (+)	2199	WP_001296625.1	primosomal protein N'	Machinery gene
ABGU70_RS22700	cytR	4696934..4697959 (+)	1026	WP_000644908.1	DNA-binding transcriptional regulator CytR	Regulator
ABGU70_RS22705	ftsN	4698051..4699010 (+)	960	WP_000068834.1	cell division protein FtsN	-
ABGU70_RS22710	hslV	4699103..4699633 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ABGU70_RS22715	hslU	4699643..4700974 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
ABGU70_RS22720	menA	4701041..4701967 (+)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ABGU70_RS22725	rraA	4702060..4702545 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ABGU70_RS22730	zapB	4702630..4702875 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37847.80 Da
• Isoelectric Point: 6.3842

>NTDB_id=1048522 ABGU70_RS22700 WP_000644908.1 4696934..4697959(+) (cytR) [Escherichia coli isolate 30348_2#44]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSRAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=1048522 ABGU70_RS22700 WP_000644908.1 4696934..4697959(+) (cytR) [Escherichia coli isolate 30348_2#44]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAGAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGTCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625