Detailed information    

insolico Bioinformatically predicted

Overview

Name   kpsS   Type   Regulator
Locus tag   R8617_RS07205 Genome accession   NZ_AP028362
Coordinates   1401285..1402469 (-) Length   394 a.a.
NCBI ID   WP_002780434.1    Uniprot ID   A0A0U3A9V8
Organism   Campylobacter jejuni strain BCH-10611     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context

Location: 1396285..1407469
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  R8617_RS07180 (B10611_14240) fliL 1397433..1397969 (+) 537 WP_002780442.1 flagellar basal body-associated protein FliL -
  R8617_RS07185 (B10611_14250) acpS 1397969..1398316 (+) 348 WP_002780441.1 holo-ACP synthase -
  R8617_RS07190 (B10611_14260) - 1398317..1398736 (-) 420 WP_002780440.1 hypothetical protein -
  R8617_RS07195 (B10611_14270) - 1398733..1400094 (-) 1362 WP_002780438.1 cytochrome P450 -
  R8617_RS07200 (B10611_14280) - 1400091..1401212 (-) 1122 WP_002780436.1 hypothetical protein -
  R8617_RS07205 (B10611_14290) kpsS 1401285..1402469 (-) 1185 WP_002780434.1 capsule polysaccharide modification protein KpsS Regulator
  R8617_RS07210 (B10611_14300) kpsC 1402466..1404535 (-) 2070 WP_032597527.1 capsular polysaccharide biosynthesis protein -
  R8617_RS07215 (B10611_14310) - 1404565..1406436 (-) 1872 WP_186820511.1 hypothetical protein -

Sequence

Protein


Download         Length: 394 a.a.        Molecular weight: 46824.57 Da        Isoelectric Point: 9.9369

>NTDB_id=104841 R8617_RS07205 WP_002780434.1 1401285..1402469(-) (kpsS) [Campylobacter jejuni strain BCH-10611]
MRFSTKIKKEFSGKNVLLLQGPVGNFFHHLAIKMKKKQTKVFKLNFNGGDFFFYPSGTRCKCDEKDLENFYRDFFQSKKI
DAILMYNDCRIIHAKAIKVAKELGIEIWIFEEGYLRPYCITLEKDGVNANSSLPRDKNFYLSQNIFTKESIKEIPGGFKF
MAFDAFLYWLFAFILAPFFNNKLHHRTLYPFEFLFWFRSLYRKYLYKITEKKLNEKIYNLEKKYFLAILQVYSDTQIKYH
YKKSIEHFIEETILSFANHARAKSYLVFKHHPMDRGYKNYSKLINDLSQKYHVEGRVLYVHDTHLPVLLRKALGCITINS
TVGLSAILEGCPTKVCGNAFYDFEGLSYPKKLQFFWREAHAYKPNPVLVCNFKKYLLQTNQFNGNFYKNFFLDK

Nucleotide


Download         Length: 1185 bp        

>NTDB_id=104841 R8617_RS07205 WP_002780434.1 1401285..1402469(-) (kpsS) [Campylobacter jejuni strain BCH-10611]
ATGAGATTTAGCACTAAAATTAAAAAAGAATTTAGCGGTAAAAATGTTTTACTCTTGCAAGGACCTGTGGGAAATTTTTT
TCATCATCTTGCAATAAAAATGAAAAAAAAACAAACCAAAGTTTTTAAACTCAATTTTAACGGTGGAGATTTTTTTTTCT
ATCCTAGTGGAACGAGGTGTAAGTGCGATGAAAAAGATCTTGAAAATTTCTATAGAGATTTTTTTCAAAGCAAAAAAATC
GATGCTATTTTAATGTATAATGATTGTCGTATTATCCATGCTAAGGCTATTAAAGTGGCTAAAGAATTAGGAATTGAAAT
ATGGATTTTTGAAGAAGGATATTTAAGGCCTTATTGTATTACTTTGGAAAAAGATGGGGTGAATGCAAATTCTTCTTTAC
CGCGTGATAAAAATTTTTATCTTTCTCAAAATATTTTTACCAAAGAAAGCATAAAAGAAATTCCAGGTGGATTTAAATTT
ATGGCTTTTGATGCTTTTTTGTATTGGTTGTTTGCTTTTATTTTGGCTCCATTTTTTAACAACAAACTTCATCATCGCAC
TTTATATCCTTTTGAATTTTTATTTTGGTTTAGATCATTGTATAGAAAGTATCTTTATAAGATTACAGAAAAAAAACTAA
ATGAAAAGATTTATAATTTAGAAAAAAAGTACTTTTTGGCGATTTTACAAGTTTATAGCGATACGCAAATTAAATATCAT
TACAAAAAAAGCATAGAGCACTTTATAGAGGAAACCATACTTTCTTTTGCAAACCATGCAAGAGCTAAATCTTATCTAGT
TTTTAAACACCATCCCATGGATAGGGGCTATAAGAATTATTCTAAACTCATAAATGATTTAAGTCAAAAATATCATGTAG
AAGGAAGGGTTTTATATGTTCATGATACCCACTTGCCAGTTCTTTTAAGAAAGGCTTTGGGTTGTATTACTATAAATTCA
ACAGTAGGCCTTAGTGCTATTTTAGAAGGCTGTCCGACTAAGGTTTGTGGCAATGCTTTTTATGATTTTGAAGGCTTATC
TTATCCAAAAAAACTTCAATTTTTTTGGCGTGAAGCTCATGCTTATAAACCCAATCCTGTTTTGGTATGTAATTTTAAAA
AATATCTTTTACAAACTAATCAATTCAACGGCAATTTTTATAAAAATTTCTTTTTAGACAAATAA

Domains

Predicted by InterproScan.

Capsule polysaccharide biosynthesis protein (Capsule_synth)

(81-387)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0U3A9V8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kpsS Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

98.223

100

0.982

Multiple sequence alignment