Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | R8617_RS05560 | Genome accession | NZ_AP028362 |
| Coordinates | 1066092..1066394 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain BCH-10611 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1061092..1071394
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R8617_RS05535 (B10611_10900) | rpsR | 1061455..1061715 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| R8617_RS05540 (B10611_10910) | lon | 1061775..1064150 (-) | 2376 | WP_317652522.1 | endopeptidase La | - |
| R8617_RS05545 (B10611_10920) | - | 1064167..1064814 (-) | 648 | WP_011049880.1 | outer membrane protein assembly factor BamD | - |
| R8617_RS05550 (B10611_10930) | fliW | 1064975..1065364 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| R8617_RS05555 (B10611_10940) | proC | 1065364..1066095 (+) | 732 | WP_002859150.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| R8617_RS05560 (B10611_10950) | ctsT | 1066092..1066394 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| R8617_RS05565 (B10611_10960) | - | 1066391..1067053 (+) | 663 | WP_146263321.1 | hypothetical protein | - |
| R8617_RS05570 (B10611_10970) | - | 1067050..1067502 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| R8617_RS05575 (B10611_10980) | hemD | 1067499..1068128 (-) | 630 | WP_234729001.1 | uroporphyrinogen-III synthase | - |
| R8617_RS05580 (B10611_10990) | thiE | 1068106..1068738 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| R8617_RS05585 (B10611_11000) | thiD | 1068728..1069540 (-) | 813 | WP_002867189.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| R8617_RS05590 (B10611_11010) | - | 1069537..1070223 (-) | 687 | WP_317652526.1 | endonuclease III domain-containing protein | - |
| R8617_RS05595 (B10611_11020) | - | 1070220..1070981 (-) | 762 | WP_002867190.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=104832 R8617_RS05560 WP_002853046.1 1066092..1066394(+) (ctsT) [Campylobacter jejuni strain BCH-10611]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=104832 R8617_RS05560 WP_002853046.1 1066092..1066394(+) (ctsT) [Campylobacter jejuni strain BCH-10611]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |