Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | R8607_RS05565 | Genome accession | NZ_AP028360 |
| Coordinates | 1061486..1061788 (+) | Length | 100 a.a. |
| NCBI ID | WP_032582988.1 | Uniprot ID | A0A5Y9CSD3 |
| Organism | Campylobacter jejuni strain BCH-10579 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1056486..1066788
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R8607_RS05540 (B10579_10830) | rpsR | 1056846..1057106 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| R8607_RS05545 (B10579_10840) | lon | 1057166..1059541 (-) | 2376 | WP_002852988.1 | endopeptidase La | - |
| R8607_RS05550 (B10579_10850) | - | 1059558..1060205 (-) | 648 | WP_002860191.1 | outer membrane protein assembly factor BamD | - |
| R8607_RS05555 (B10579_10860) | fliW | 1060366..1060755 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| R8607_RS05560 (B10579_10870) | proC | 1060755..1061489 (+) | 735 | WP_032582987.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| R8607_RS05565 (B10579_10880) | ctsT | 1061486..1061788 (+) | 303 | WP_032582988.1 | transformation system protein | Machinery gene |
| R8607_RS05570 (B10579_10890) | - | 1061785..1062447 (+) | 663 | WP_052778507.1 | hypothetical protein | - |
| R8607_RS05575 (B10579_10900) | - | 1062444..1062896 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| R8607_RS05580 (B10579_10910) | hemD | 1062893..1063522 (-) | 630 | WP_002859147.1 | uroporphyrinogen-III synthase | - |
| R8607_RS05585 (B10579_10920) | thiE | 1063500..1064132 (-) | 633 | WP_052778506.1 | thiamine phosphate synthase | - |
| R8607_RS05590 (B10579_10930) | thiD | 1064122..1064934 (-) | 813 | WP_052778523.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| R8607_RS05595 (B10579_10940) | - | 1064931..1065617 (-) | 687 | WP_002852847.1 | endonuclease III domain-containing protein | - |
| R8607_RS05600 (B10579_10950) | - | 1065614..1066375 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12150.21 Da Isoelectric Point: 6.2957
>NTDB_id=104780 R8607_RS05565 WP_032582988.1 1061486..1061788(+) (ctsT) [Campylobacter jejuni strain BCH-10579]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTTILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTTILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=104780 R8607_RS05565 WP_032582988.1 1061486..1061788(+) (ctsT) [Campylobacter jejuni strain BCH-10579]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCACCATACTTCAAACTTCAGCCTTGAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCACCATACTTCAAACTTCAGCCTTGAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
98 |
100 |
0.98 |