Detailed information NTG1047708

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: AADG37_RS14120
• Genome accession: NZ_OZ001712
• Coordinates: 2946107..2947132 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644908.1
• Uniprot ID: -
• Organism: Escherichia coli strain JEB8 MIAE 10523
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 2941107..2952132

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AADG37_RS14090 (FIEDEJGE_02752)	zapB	2941191..2941436 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
AADG37_RS14095 (FIEDEJGE_02753)	rraA	2941521..2942006 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
AADG37_RS14100 (FIEDEJGE_02754)	menA	2942099..2943025 (-)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
AADG37_RS14105 (FIEDEJGE_02755)	hslU	2943092..2944423 (-)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
AADG37_RS14110 (FIEDEJGE_02756)	hslV	2944433..2944963 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
AADG37_RS14115 (FIEDEJGE_02757)	ftsN	2945056..2946015 (-)	960	WP_000068834.1	cell division protein FtsN	-
AADG37_RS14120 (FIEDEJGE_02758)	cytR	2946107..2947132 (-)	1026	WP_000644908.1	DNA-binding transcriptional regulator CytR	Regulator
AADG37_RS14125 (FIEDEJGE_02759)	priA	2947288..2949486 (-)	2199	WP_001550368.1	primosomal protein N'	Machinery gene
AADG37_RS14130 (FIEDEJGE_02760)	rpmE	2949689..2949901 (+)	213	WP_000710769.1	50S ribosomal protein L31	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37847.80 Da
• Isoelectric Point: 6.3842

>NTDB_id=1047708 AADG37_RS14120 WP_000644908.1 2946107..2947132(-) (cytR) [Escherichia coli strain JEB8 MIAE 10523]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSRAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=1047708 AADG37_RS14120 WP_000644908.1 2946107..2947132(-) (cytR) [Escherichia coli strain JEB8 MIAE 10523]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAGAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGTCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625