Detailed information NTG1047640

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: U5A48_RS22480
• Genome accession: NZ_OY856299
• Coordinates: 4658792..4659817 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain EC7072022BGR isolate EC7072022
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4653792..4664817

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
U5A48_RS22470 (ECOL707_23450)	rpmE	4656023..4656235 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
U5A48_RS22475 (ECOL707_23455)	priA	4656438..4658636 (+)	2199	WP_001368117.1	primosomal protein N'	Machinery gene
U5A48_RS22480 (ECOL707_23460)	cytR	4658792..4659817 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
U5A48_RS22485 (ECOL707_23465)	ftsN	4659909..4660868 (+)	960	WP_000068834.1	cell division protein FtsN	-
U5A48_RS22490 (ECOL707_23470)	hslV	4660961..4661491 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
U5A48_RS22495 (ECOL707_23475)	hslU	4661501..4662832 (+)	1332	WP_001293343.1	HslU--HslV peptidase ATPase subunit	-
U5A48_RS22500 (ECOL707_23480)	menA	4662899..4663825 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
U5A48_RS22505 (ECOL707_23485)	rraA	4663918..4664403 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
U5A48_RS22510 (ECOL707_23490)	zapB	4664488..4664733 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=1047640 U5A48_RS22480 WP_000644904.1 4658792..4659817(+) (cytR) [Escherichia coli strain EC7072022BGR isolate EC7072022]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=1047640 U5A48_RS22480 WP_000644904.1 4658792..4659817(+) (cytR) [Escherichia coli strain EC7072022BGR isolate EC7072022]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAACCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGCTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTCGCACCGGAACTGGAG
CTACCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATCTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGTTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628