Detailed information NTG0104756

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: NTHI723_RS05895
• Genome accession: NZ_CP007472
• Coordinates: 1195531..1196529 (-)
• Length: 332 a.a.
• NCBI ID: WP_005659739.1
• Uniprot ID: -
• Organism: Haemophilus influenzae strain 723
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 1190531..1201529

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NTHI723_RS05870 (NTHI723_01181)	tehA	1191499..1192443 (+)	945	WP_005659732.1	dicarboxylate transporter/tellurite-resistance protein TehA	-
NTHI723_RS05875 (NTHI723_01182)	tsaA	1192496..1193215 (-)	720	WP_011272092.1	tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO	-
NTHI723_RS05880 (NTHI723_01183)	menA	1193277..1194194 (+)	918	WP_032827535.1	1,4-dihydroxy-2-naphthoate octaprenyltransferase	-
NTHI723_RS05885 (NTHI723_01184)	rraA	1194246..1194734 (+)	489	WP_005649446.1	ribonuclease E activity regulator RraA	-
NTHI723_RS05890 (NTHI723_01185)	-	1194874..1195425 (-)	552	WP_005649445.1	TIGR00645 family protein	-
NTHI723_RS05895 (NTHI723_01186)	cytR	1195531..1196529 (-)	999	WP_005659739.1	substrate-binding domain-containing protein	Regulator
NTHI723_RS05900 (NTHI723_01187)	rbsK	1196557..1197477 (-)	921	WP_011272090.1	ribokinase	-
NTHI723_RS05905 (NTHI723_01188)	rbsB	1197575..1198453 (-)	879	WP_005639843.1	ribose ABC transporter substrate-binding protein RbsB	-
NTHI723_RS05910 (NTHI723_01189)	rbsC	1198473..1199441 (-)	969	WP_044364743.1	ribose ABC transporter permease	-
NTHI723_RS05915 (NTHI723_01190)	rbsA	1199457..1200938 (-)	1482	WP_044364746.1	ribose ABC transporter ATP-binding protein RbsA	-
NTHI723_RS05920 (NTHI723_01191)	rbsD	1200952..1201371 (-)	420	WP_005693672.1	D-ribose pyranase	-

Sequence

Protein

• Length: 332 a.a.
• Molecular weight: 36706.44 Da
• Isoelectric Point: 7.6368

>NTDB_id=104756 NTHI723_RS05895 WP_005659739.1 1195531..1196529(-) (cytR) [Haemophilus influenzae strain 723]
MATMKDIARLAQVSTSTVSHVINGSRFVSDEIREKVMRIVAELNYTPSAVARSLKVRETKTIGLLVTATNNPFFAEVMAG
VEQYCQKNQYNLIIATTGGDAKRLQQNLQTLMHKQVDGLLLMCGDSRFQADIELAISLPLVVMDWWFTELNADKILENSA
LGGYLATKALIDAGHRKIGIITGNLKKSVAQNRLQGYKNALSEAKIALNPHWIVESHFDFEGGVLGIQSLLTQSSRPTAV
FCCSDTIAVGAYQAIQQQGLRIPQDLSIMGYDDIELARYLSPPLSTICQPKAELGKLAVETLLQRIKNPNENYLTLVLEP
TCVLRESIYSFK

Nucleotide

• Length: 999 bp

>NTDB_id=104756 NTHI723_RS05895 WP_005659739.1 1195531..1196529(-) (cytR) [Haemophilus influenzae strain 723]
ATGGCGACAATGAAAGATATTGCACGACTGGCGCAAGTTTCGACTTCTACAGTTTCACATGTCATTAATGGATCGCGTTT
TGTTAGCGATGAAATTCGTGAGAAAGTGATGCGTATTGTCGCTGAACTGAATTACACCCCTTCAGCTGTTGCACGAAGCC
TTAAGGTGCGCGAAACCAAAACTATCGGGCTACTTGTCACCGCAACAAATAATCCCTTCTTTGCGGAAGTGATGGCTGGC
GTGGAGCAATATTGTCAGAAAAATCAATATAATCTTATTATTGCTACAACGGGTGGAGATGCCAAACGCCTACAACAAAA
TCTGCAAACTCTAATGCACAAACAAGTGGATGGTTTGCTTTTGATGTGTGGTGATAGCCGTTTTCAGGCTGATATAGAGT
TAGCCATTTCGCTGCCACTGGTTGTGATGGACTGGTGGTTTACTGAGTTAAATGCAGATAAAATACTCGAAAATTCAGCA
CTTGGTGGCTATTTGGCGACAAAAGCATTAATTGATGCAGGACATCGTAAAATTGGCATTATTACGGGAAATCTCAAAAA
ATCTGTCGCACAAAATCGTTTGCAAGGTTATAAAAATGCGCTGTCGGAAGCAAAAATTGCGTTAAATCCTCATTGGATTG
TCGAAAGTCATTTTGACTTTGAAGGCGGTGTACTTGGCATACAATCTTTACTTACTCAATCTTCACGTCCAACAGCAGTT
TTTTGTTGTAGTGACACCATTGCTGTCGGTGCATACCAAGCTATTCAGCAACAAGGCTTACGTATTCCGCAAGATCTTTC
AATTATGGGCTATGATGACATTGAATTGGCTCGTTATCTCTCGCCTCCTCTCTCCACCATTTGCCAACCGAAAGCTGAAC
TTGGCAAACTCGCTGTTGAAACACTATTGCAACGAATTAAAAATCCTAATGAAAATTACCTCACTTTGGTGTTAGAACCG
ACTTGTGTGTTAAGAGAGTCTATTTACAGTTTCAAATAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-327)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	36.89	98.795	0.364
cytR	Vibrio cholerae C6706	36.585	98.795	0.361