Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | R8564_RS06145 | Genome accession | NZ_AP028359 |
| Coordinates | 1162812..1163114 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain BCH-10570 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1157812..1168114
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R8564_RS06120 (B10570_12230) | rpsR | 1158175..1158435 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| R8564_RS06125 (B10570_12240) | lon | 1158495..1160870 (-) | 2376 | WP_002901106.1 | endopeptidase La | - |
| R8564_RS06130 (B10570_12250) | - | 1160887..1161534 (-) | 648 | WP_002860191.1 | outer membrane protein assembly factor BamD | - |
| R8564_RS06135 (B10570_12260) | fliW | 1161695..1162084 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| R8564_RS06140 (B10570_12270) | proC | 1162084..1162815 (+) | 732 | WP_002859150.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| R8564_RS06145 (B10570_12280) | ctsT | 1162812..1163114 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| R8564_RS06150 (B10570_12290) | - | 1163111..1163773 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| R8564_RS06155 (B10570_12300) | - | 1163770..1164222 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| R8564_RS06160 (B10570_12310) | hemD | 1164219..1164848 (-) | 630 | WP_002859147.1 | uroporphyrinogen-III synthase | - |
| R8564_RS06165 (B10570_12320) | thiE | 1164826..1165458 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| R8564_RS06170 (B10570_12330) | thiD | 1165448..1166260 (-) | 813 | WP_002901102.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| R8564_RS06175 (B10570_12340) | - | 1166257..1166943 (-) | 687 | WP_002901100.1 | endonuclease III domain-containing protein | - |
| R8564_RS06180 (B10570_12350) | - | 1166940..1167701 (-) | 762 | WP_002856328.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=104752 R8564_RS06145 WP_002853046.1 1162812..1163114(+) (ctsT) [Campylobacter jejuni strain BCH-10570]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=104752 R8564_RS06145 WP_002853046.1 1162812..1163114(+) (ctsT) [Campylobacter jejuni strain BCH-10570]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |