Detailed information NTG1047039

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: R8904_RS00285
• Genome accession: NZ_OY754453
• Coordinates: 46504..47529 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli isolate F95
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 41504..52529

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R8904_RS00255 (FGAF95_00510)	zapB	41588..41833 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
R8904_RS00260 (FGAF95_00520)	rraA	41918..42403 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
R8904_RS00265 (FGAF95_00530)	menA	42496..43422 (-)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
R8904_RS00270 (FGAF95_00540)	hslU	43489..44820 (-)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
R8904_RS00275 (FGAF95_00550)	hslV	44830..45360 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
R8904_RS00280 (FGAF95_00560)	ftsN	45453..46412 (-)	960	WP_000068828.1	cell division protein FtsN	-
R8904_RS00285 (FGAF95_00570)	cytR	46504..47529 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
R8904_RS00290 (FGAF95_00580)	priA	47685..49883 (-)	2199	WP_001300388.1	primosomal protein N'	Machinery gene
R8904_RS00295 (FGAF95_00590)	rpmE	50086..50298 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
R8904_RS00300 (FGAF95_00600)	yiiX	50359..50967 (-)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
R8904_RS00305 (FGAF95_00610)	metJ	51151..51468 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=1047039 R8904_RS00285 WP_000644904.1 46504..47529(-) (cytR) [Escherichia coli isolate F95]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=1047039 R8904_RS00285 WP_000644904.1 46504..47529(-) (cytR) [Escherichia coli isolate F95]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTTCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628