Detailed information NTG1047028

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: R8822_RS21515
• Genome accession: NZ_OY754443
• Coordinates: 4393676..4394701 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli isolate F829
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4388676..4399701

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R8822_RS21495 (FGAF829_41370)	metJ	4389737..4390054 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
R8822_RS21500 (FGAF829_41380)	yiiX	4390238..4390846 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
R8822_RS21505 (FGAF829_41390)	rpmE	4390907..4391119 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
R8822_RS21510 (FGAF829_41400)	priA	4391322..4393520 (+)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
R8822_RS21515 (FGAF829_41410)	cytR	4393676..4394701 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
R8822_RS21520 (FGAF829_41420)	ftsN	4394793..4395752 (+)	960	WP_000068828.1	cell division protein FtsN	-
R8822_RS21525 (FGAF829_41430)	hslV	4395845..4396375 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
R8822_RS21530 (FGAF829_41440)	hslU	4396385..4397716 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
R8822_RS21535 (FGAF829_41450)	menA	4397783..4398709 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
R8822_RS21540 (FGAF829_41460)	rraA	4398802..4399287 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
R8822_RS21545 (FGAF829_41470)	zapB	4399372..4399617 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=1047028 R8822_RS21515 WP_000644904.1 4393676..4394701(+) (cytR) [Escherichia coli isolate F829]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=1047028 R8822_RS21515 WP_000644904.1 4393676..4394701(+) (cytR) [Escherichia coli isolate F829]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628