Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | R8661_RS05280 | Genome accession | NZ_AP028357 |
| Coordinates | 1021781..1022083 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain BCH-10544 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1016781..1027083
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R8661_RS05255 (B10544_10400) | rpsR | 1017143..1017403 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| R8661_RS05260 (B10544_10410) | lon | 1017464..1019839 (-) | 2376 | WP_002868636.1 | endopeptidase La | - |
| R8661_RS05265 (B10544_10420) | - | 1019856..1020503 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| R8661_RS05270 (B10544_10430) | fliW | 1020664..1021053 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| R8661_RS05275 (B10544_10440) | proC | 1021053..1021784 (+) | 732 | WP_002868635.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| R8661_RS05280 (B10544_10450) | ctsT | 1021781..1022083 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| R8661_RS05285 (B10544_10460) | - | 1022080..1022742 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| R8661_RS05290 (B10544_10470) | - | 1022739..1023191 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| R8661_RS05295 (B10544_10480) | hemD | 1023188..1023817 (-) | 630 | WP_002868634.1 | uroporphyrinogen-III synthase | - |
| R8661_RS05300 (B10544_10490) | thiE | 1023795..1024427 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| R8661_RS05305 (B10544_10500) | thiD | 1024417..1025229 (-) | 813 | WP_002868633.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| R8661_RS05310 (B10544_10510) | - | 1025226..1025912 (-) | 687 | WP_002868632.1 | endonuclease III domain-containing protein | - |
| R8661_RS05315 (B10544_10520) | - | 1025909..1026670 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=104698 R8661_RS05280 WP_002853046.1 1021781..1022083(+) (ctsT) [Campylobacter jejuni strain BCH-10544]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=104698 R8661_RS05280 WP_002853046.1 1021781..1022083(+) (ctsT) [Campylobacter jejuni strain BCH-10544]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |