Detailed information NTG1046786

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: R8807_RS22385
• Genome accession: NZ_OY754416
• Coordinates: 4508061..4509086 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli isolate F1267
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4503061..4514086

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R8807_RS22365 (FGAF1267_43580)	metJ	4504122..4504439 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
R8807_RS22370 (FGAF1267_43590)	yiiX	4504623..4505231 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
R8807_RS22375 (FGAF1267_43600)	rpmE	4505292..4505504 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
R8807_RS22380 (FGAF1267_43610)	priA	4505707..4507905 (+)	2199	WP_317735562.1	primosomal protein N'	Machinery gene
R8807_RS22385 (FGAF1267_43620)	cytR	4508061..4509086 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
R8807_RS22390 (FGAF1267_43630)	ftsN	4509178..4510137 (+)	960	WP_097346388.1	cell division protein FtsN	-
R8807_RS22395 (FGAF1267_43640)	hslV	4510230..4510760 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
R8807_RS22400 (FGAF1267_43650)	hslU	4510770..4512101 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
R8807_RS22405 (FGAF1267_43660)	menA	4512168..4513094 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
R8807_RS22410 (FGAF1267_43670)	rraA	4513187..4513672 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
R8807_RS22415 (FGAF1267_43680)	zapB	4513757..4514002 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=1046786 R8807_RS22385 WP_000644904.1 4508061..4509086(+) (cytR) [Escherichia coli isolate F1267]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=1046786 R8807_RS22385 WP_000644904.1 4508061..4509086(+) (cytR) [Escherichia coli isolate F1267]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628