Detailed information NTG1046706

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: R8801_RS22450
• Genome accession: NZ_OY754409
• Coordinates: 4565709..4566734 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli isolate F467
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4560709..4571734

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R8801_RS22430 (FGAF467_43190)	metJ	4561770..4562087 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
R8801_RS22435 (FGAF467_43200)	yiiX	4562271..4562879 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
R8801_RS22440 (FGAF467_43210)	rpmE	4562940..4563152 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
R8801_RS22445 (FGAF467_43220)	priA	4563355..4565553 (+)	2199	WP_001424430.1	primosomal protein N'	Machinery gene
R8801_RS22450 (FGAF467_43230)	cytR	4565709..4566734 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
R8801_RS22455 (FGAF467_43240)	ftsN	4566826..4567785 (+)	960	WP_000068828.1	cell division protein FtsN	-
R8801_RS22460 (FGAF467_43250)	hslV	4567878..4568408 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
R8801_RS22465 (FGAF467_43260)	hslU	4568418..4569749 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
R8801_RS22470 (FGAF467_43270)	menA	4569816..4570742 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
R8801_RS22475 (FGAF467_43280)	rraA	4570835..4571320 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
R8801_RS22480 (FGAF467_43290)	zapB	4571405..4571650 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=1046706 R8801_RS22450 WP_000644904.1 4565709..4566734(+) (cytR) [Escherichia coli isolate F467]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=1046706 R8801_RS22450 WP_000644904.1 4565709..4566734(+) (cytR) [Escherichia coli isolate F467]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628