Detailed information NTG1045977

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: R8966_RS23185
• Genome accession: NZ_OY754357
• Coordinates: 4729744..4730769 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli isolate F1022
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4724744..4735769

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R8966_RS23160 (FGAF1022_44940)	metJ	4725181..4725498 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
R8966_RS23165 (FGAF1022_44950)	yiiX	4725682..4726290 (+)	609	WP_000797341.1	YiiX family permuted papain-like enzyme	-
R8966_RS23170 (FGAF1022_44960)	-	4726297..4726920 (+)	624	WP_000720774.1	TIGR02117 family protein	-
R8966_RS23175 (FGAF1022_44970)	rpmE	4726975..4727187 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
R8966_RS23180 (FGAF1022_44980)	priA	4727390..4729588 (+)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
R8966_RS23185 (FGAF1022_44990)	cytR	4729744..4730769 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
R8966_RS23190 (FGAF1022_45000)	ftsN	4730861..4731820 (+)	960	WP_000068828.1	cell division protein FtsN	-
R8966_RS23195 (FGAF1022_45010)	hslV	4731913..4732443 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
R8966_RS23200 (FGAF1022_45020)	hslU	4732453..4733784 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
R8966_RS23205 (FGAF1022_45030)	menA	4733851..4734777 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
R8966_RS23210 (FGAF1022_45040)	rraA	4734870..4735355 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
R8966_RS23215 (FGAF1022_45050)	zapB	4735440..4735685 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=1045977 R8966_RS23185 WP_000644904.1 4729744..4730769(+) (cytR) [Escherichia coli isolate F1022]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=1045977 R8966_RS23185 WP_000644904.1 4729744..4730769(+) (cytR) [Escherichia coli isolate F1022]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628