Detailed information NTG1045895

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: R8832_RS21950
• Genome accession: NZ_OY754353
• Coordinates: 4512108..4513133 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli isolate F1005
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4507108..4518133

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R8832_RS21930 (FGAF1005_42060)	metJ	4508169..4508486 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
R8832_RS21935 (FGAF1005_42070)	yiiX	4508670..4509278 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
R8832_RS21940 (FGAF1005_42080)	rpmE	4509339..4509551 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
R8832_RS21945 (FGAF1005_42090)	priA	4509754..4511952 (+)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
R8832_RS21950 (FGAF1005_42100)	cytR	4512108..4513133 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
R8832_RS21955 (FGAF1005_42110)	ftsN	4513225..4514184 (+)	960	WP_000068828.1	cell division protein FtsN	-
R8832_RS21960 (FGAF1005_42120)	hslV	4514277..4514807 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
R8832_RS21965 (FGAF1005_42130)	hslU	4514817..4516148 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
R8832_RS21970 (FGAF1005_42140)	menA	4516215..4517141 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
R8832_RS21975 (FGAF1005_42150)	rraA	4517234..4517719 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
R8832_RS21980 (FGAF1005_42160)	zapB	4517804..4518049 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=1045895 R8832_RS21950 WP_000644904.1 4512108..4513133(+) (cytR) [Escherichia coli isolate F1005]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=1045895 R8832_RS21950 WP_000644904.1 4512108..4513133(+) (cytR) [Escherichia coli isolate F1005]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628