Detailed information NTG1045679

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: RCP39_RS03570
• Genome accession: NZ_OY725974
• Coordinates: 756570..757652 (+)
• Length: 360 a.a.
• NCBI ID: WP_000370983.1
• Uniprot ID: -
• Organism: Staphylococcus aureus strain Sa_BGR_NF1 isolate Sa_BGR_NF1
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 751570..762652

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RCP39_RS03550 (SAUR1852_03510)	-	751948..753018 (-)	1071	WP_000460983.1	GGDEF domain-containing protein	-
RCP39_RS03555 (SAUR1852_03515)	-	753336..754391 (+)	1056	WP_000258150.1	glycosyltransferase family 4 protein	-
RCP39_RS03560 (SAUR1852_03520)	-	754555..755196 (-)	642	WP_000192949.1	YigZ family protein	-
RCP39_RS03565 (SAUR1852_03525)	fakB1	755340..756206 (+)	867	WP_000686345.1	fatty acid kinase binding subunit FakB1	-
RCP39_RS03570 (SAUR1852_03530)	comFA	756570..757652 (+)	1083	WP_000370983.1	DEAD/DEAH box helicase	Machinery gene
RCP39_RS03575 (SAUR1852_03535)	-	757645..758319 (+)	675	WP_001057962.1	ComF family protein	-
RCP39_RS03580 (SAUR1852_03540)	hpf	758380..758952 (+)	573	WP_000617735.1	ribosome hibernation-promoting factor, HPF/YfiA family	-
RCP39_RS03585 (SAUR1852_03545)	secA	759366..761897 (+)	2532	WP_000506529.1	preprotein translocase subunit SecA	-
RCP39_RS03590	-	761939..762058 (+)	120	WP_031774844.1	hypothetical protein	-

Sequence

Protein

• Length: 360 a.a.
• Molecular weight: 42038.52 Da
• Isoelectric Point: 9.6802

>NTDB_id=1045679 RCP39_RS03570 WP_000370983.1 756570..757652(+) (comFA) [Staphylococcus aureus strain Sa_BGR_NF1 isolate Sa_BGR_NF1]
MDNVTRYKITESSQSSSQAYYHLSFELSEQQSYASEHIVRAIRMRQTILLYAVTGAGKTEMMFQGIQYARRQGDNIAIVS
PRVDVVVEISKRIKDAFLNEDIDILHQQSSQQFEGHFVVCTVHQLYRFKQHFDTIFIDEVDAFPLSMDKSLQQALKSSSK
IEHATIYMTATPPKQLLSEIPHENIIKLPARFHKKSLPVPKYRYFKLNNNKIQKMLYRILQDQINNQRYTLVFFNNIETM
IKTFSIYKQKITKLTYVHSEDVFRFEKVEQLRNGQFDVIFTTTILERGFTMANLDVVVIDAHQYTQEALIQIAGRVGRKL
ECPTGKVLFFHEGVSMNMIQAKKEIQKMNKLALKRGWIDE

Nucleotide

• Length: 1083 bp

>NTDB_id=1045679 RCP39_RS03570 WP_000370983.1 756570..757652(+) (comFA) [Staphylococcus aureus strain Sa_BGR_NF1 isolate Sa_BGR_NF1]
ATGGATAATGTAACAAGATATAAAATAACAGAAAGTTCGCAAAGTTCATCACAAGCATATTATCATCTCTCATTTGAATT
GTCGGAACAACAGTCTTATGCCTCAGAACATATTGTTCGAGCCATTAGAATGAGACAAACGATTTTGTTATATGCAGTAA
CAGGAGCAGGTAAGACAGAAATGATGTTCCAAGGCATTCAATATGCAAGACGACAGGGAGATAATATAGCTATTGTGTCA
CCACGTGTAGATGTTGTTGTAGAAATTAGTAAACGTATTAAAGACGCATTTCTTAATGAAGATATAGACATACTACACCA
GCAATCAAGTCAACAATTTGAAGGGCATTTTGTTGTATGCACAGTGCATCAACTTTACCGATTCAAACAGCACTTTGATA
CTATTTTTATTGATGAAGTCGATGCCTTTCCTTTATCAATGGATAAAAGTTTACAACAAGCATTGAAGTCATCTTCTAAA
ATTGAACATGCAACGATTTATATGACAGCAACACCACCGAAACAACTTCTGTCAGAGATTCCCCACGAAAATATAATTAA
ATTGCCAGCTCGCTTTCATAAAAAATCACTTCCAGTTCCTAAATATCGCTATTTCAAACTTAATAATAATAAGATTCAGA
AAATGTTATATCGAATTTTACAAGATCAAATTAATAATCAACGTTATACACTGGTGTTTTTTAACAATATAGAAACAATG
ATTAAAACATTTTCGATTTATAAGCAGAAAATTACTAAATTAACATATGTCCATAGCGAGGATGTTTTTCGCTTTGAAAA
AGTTGAACAATTAAGGAATGGACAATTCGATGTCATTTTTACTACGACAATATTAGAACGTGGATTTACAATGGCAAATT
TAGATGTTGTTGTTATCGATGCACATCAATATACTCAAGAGGCTTTAATACAAATTGCTGGACGTGTTGGACGAAAATTA
GAATGTCCTACTGGAAAAGTATTGTTTTTTCATGAAGGTGTAAGTATGAATATGATTCAAGCTAAAAAAGAGATTCAAAA
GATGAACAAATTAGCATTAAAAAGAGGTTGGATTGATGAATAA

Domains

Predicted by InterProScan.

• Type III restriction enzyme, res subunit (ResIII) (25-173)

• Helicase conserved C-terminal domain (Helicase_C) (215-318)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	39.233	94.167	0.369