Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0A   Type   Regulator
Locus tag   AAEM72_RS20625 Genome accession   NZ_CP168764
Coordinates   3976748..3977542 (-) Length   264 a.a.
NCBI ID   WP_003161566.1    Uniprot ID   P52928
Organism   Bacillus anthracis strain Z03-J001     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context


Location: 3971748..3982542
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAEM72_RS20605 (AAEM72_20605) - 3973550..3973783 (+) 234 WP_001190187.1 DUF2627 domain-containing protein -
  AAEM72_RS20610 (AAEM72_20610) - 3973832..3974560 (-) 729 WP_000172561.1 glycerophosphodiester phosphodiesterase -
  AAEM72_RS20615 (AAEM72_20615) - 3974611..3974757 (+) 147 WP_001247670.1 YycC family protein -
  AAEM72_RS20620 (AAEM72_20620) - 3974925..3976450 (-) 1526 Protein_3986 hypothetical protein -
  AAEM72_RS20625 (AAEM72_20625) spo0A 3976748..3977542 (-) 795 WP_003161566.1 sporulation transcription factor Spo0A Regulator
  AAEM72_RS20630 (AAEM72_20630) spoIVB 3977830..3979128 (-) 1299 WP_002037056.1 SpoIVB peptidase -
  AAEM72_RS20635 (AAEM72_20635) recN 3979247..3980986 (-) 1740 WP_000947757.1 DNA repair protein RecN Machinery gene
  AAEM72_RS20640 (AAEM72_20640) argR 3981254..3981703 (-) 450 WP_001032581.1 arginine repressor ArgR -

Sequence


Protein


Download         Length: 264 a.a.        Molecular weight: 29440.17 Da        Isoelectric Point: 7.4718

>NTDB_id=1045607 AAEM72_RS20625 WP_003161566.1 3976748..3977542(-) (spo0A) [Bacillus anthracis strain Z03-J001]
MEKIKVCLVDDNKELVSMLESYVAAQDDMEVIGTAYNGQECLNLLKDKQPDVLVLDIIMPHLDGLAVLEKMRHIERLRQP
SVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLTSHIRQVSGKANATIKRPLPSFRSATTVDGKPKNLDASITSIIHE
IGVPAHIKGYMYLREAISMVYNDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVSMS
KAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 795 bp        

>NTDB_id=1045607 AAEM72_RS20625 WP_003161566.1 3976748..3977542(-) (spo0A) [Bacillus anthracis strain Z03-J001]
GTGGAGAAAATTAAAGTATGTCTTGTGGATGATAATAAAGAATTAGTATCAATGCTAGAGAGTTATGTAGCTGCTCAAGA
TGATATGGAAGTAATCGGTACTGCTTATAATGGTCAAGAGTGTTTAAATTTATTAAAAGATAAGCAGCCGGATGTACTCG
TATTGGATATTATTATGCCACATTTAGATGGTTTAGCTGTACTAGAGAAAATGCGACATATTGAAAGGTTAAGACAGCCT
AGCGTAATTATGTTGACAGCATTTGGACAAGAAGATGTGACGAAAAAAGCAGTTGACTTAGGTGCTTCATATTTCATATT
AAAACCATTTGATATGGAAAATTTAACGAGTCATATTCGTCAAGTGAGCGGTAAGGCGAACGCTACTATTAAACGTCCAC
TGCCATCTTTCCGATCAGCAACAACAGTAGATGGAAAACCGAAAAATTTAGACGCGAGCATTACGAGTATCATTCATGAA
ATTGGTGTGCCTGCTCATATTAAAGGGTACATGTACTTAAGGGAAGCAATTTCTATGGTGTACAATGATATCGAATTACT
TGGATCTATTACGAAAGTATTGTATCCAGATATCGCGAAGAAATATAATACAACAGCAAGCCGCGTTGAGCGTGCAATCC
GTCACGCAATTGAAGTAGCATGGAGTCGTGGGAATATTGATTCTATTTCGTCCTTATTCGGTTATACAGTATCCATGTCA
AAAGCAAAACCTACGAACTCTGAGTTTATTGCAATGGTTGCGGATAAGTTGAGACTTGAACATAAGGCTAGCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB P52928

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

80.899

100

0.818


Multiple sequence alignment