Detailed information    

insolico Bioinformatically predicted

Overview

Name   agrA   Type   Regulator
Locus tag   D712_RS10475 Genome accession   NZ_CP168754
Coordinates   2102569..2103285 (+) Length   238 a.a.
NCBI ID   WP_000688492.1    Uniprot ID   A0A7U7IEW1
Organism   Staphylococcus aureus strain D712     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2097569..2108285
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D712_RS10445 (D712_010445) - 2097787..2098413 (+) 627 WP_000522386.1 nitroreductase family protein -
  D712_RS10450 (D712_010450) - 2098774..2099559 (+) 786 WP_000867951.1 carbon-nitrogen family hydrolase -
  D712_RS10455 hld 2100159..2100239 (-) 81 WP_000046022.1 delta-hemolysin -
  D712_RS10460 (D712_010460) - 2100475..2101110 (+) 636 WP_001809992.1 accessory gene regulator AgrB -
  D712_RS10465 (D712_010465) agrD 2101094..2101237 (+) 144 WP_001094921.1 cyclic lactone autoinducer peptide AgrD -
  D712_RS10470 (D712_010470) agrC 2101267..2102550 (+) 1284 WP_000447888.1 quorum-sensing sensor histidine kinase AgrC -
  D712_RS10475 (D712_010475) agrA 2102569..2103285 (+) 717 WP_000688492.1 quorum-sensing response regulator AgrA Regulator
  D712_RS10480 (D712_010480) - 2103357..2103466 (+) 110 Protein_2027 hypothetical protein -
  D712_RS10485 (D712_010485) - 2103654..2104613 (-) 960 WP_001253312.1 carbohydrate kinase -
  D712_RS10490 (D712_010490) - 2104610..2106094 (-) 1485 WP_000141432.1 sucrose-6-phosphate hydrolase -
  D712_RS10495 (D712_010495) - 2106243..2107193 (-) 951 WP_000790331.1 LacI family DNA-binding transcriptional regulator -

Sequence

Protein


Download         Length: 238 a.a.        Molecular weight: 27905.90 Da        Isoelectric Point: 6.0927

>NTDB_id=1045538 D712_RS10475 WP_000688492.1 2102569..2103285(+) (agrA) [Staphylococcus aureus strain D712]
MKIFICEDDPKQRENMVTIIKNYIMIEEKPMEIALATDNPYEVLEQAKNMNDIGCYFLDIQLSTDINGIKLGSEIRKHDP
VGNIIFVTSHSELTYLTFVYKVAAMDFIFKDDPAELRTRIIDCLETAHTRLQLLSKDNSVETIELKRGSNSVYVQYDDIM
FFESSTKSHRLIAHLDNRQIEFYGNLKELSQLDDRFFRCHNSFVVNRHNIESIDSKERIVYFKNKEHCYASVRNVKKI

Nucleotide


Download         Length: 717 bp        

>NTDB_id=1045538 D712_RS10475 WP_000688492.1 2102569..2103285(+) (agrA) [Staphylococcus aureus strain D712]
ATGAAAATTTTCATTTGCGAAGACGATCCAAAACAAAGAGAAAACATGGTTACCATTATTAAAAATTATATAATGATAGA
AGAAAAGCCTATGGAAATTGCCCTCGCAACTGATAATCCTTATGAGGTGCTTGAGCAAGCTAAAAATATGAATGACATAG
GCTGTTACTTTTTAGATATTCAACTTTCAACTGATATTAATGGTATCAAATTAGGCAGTGAAATTCGTAAGCATGACCCA
GTTGGTAACATTATTTTCGTTACGAGTCACAGTGAACTTACCTATTTAACATTTGTCTACAAAGTTGCAGCGATGGATTT
TATTTTTAAAGATGATCCAGCAGAATTAAGAACTCGAATTATAGATTGTTTAGAAACTGCACATACACGCTTACAATTGT
TGTCTAAAGATAATAGCGTTGAAACGATTGAATTAAAACGTGGCAGTAATTCAGTGTATGTTCAATATGATGATATTATG
TTTTTTGAATCATCAACAAAATCTCACAGACTCATTGCCCATTTAGATAACCGTCAAATTGAATTTTATGGTAATTTAAA
AGAACTGAGTCAATTAGATGATCGTTTCTTTAGATGTCATAATAGCTTTGTCGTCAATCGCCATAATATTGAATCTATAG
ATTCGAAAGAGCGAATTGTCTATTTTAAAAATAAAGAACACTGCTATGCATCGGTGAGAAACGTTAAAAAAATATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-120)

LytTr DNA-binding domain (LytTR)

(151-237)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7IEW1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  agrA Staphylococcus aureus N315

100

100

1

Multiple sequence alignment