Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | ACEQ39_RS15170 | Genome accession | NZ_CP168751 |
| Coordinates | 3274575..3275702 (-) | Length | 375 a.a. |
| NCBI ID | WP_013213631.1 | Uniprot ID | A0A1U9VHA8 |
| Organism | Ralstonia syzygii subsp. celebesensis strain NCPPB 3725 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3269575..3280702
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACEQ39_RS15145 (ACEQ39_15145) | - | 3270272..3271534 (-) | 1263 | WP_078222378.1 | CmpA/NrtA family ABC transporter substrate-binding protein | - |
| ACEQ39_RS15150 (ACEQ39_15150) | - | 3271811..3272437 (-) | 627 | WP_013213635.1 | ANTAR domain-containing response regulator | - |
| ACEQ39_RS15155 (ACEQ39_15155) | - | 3272588..3273289 (+) | 702 | WP_078222379.1 | fumarylacetoacetate hydrolase family protein | - |
| ACEQ39_RS15160 (ACEQ39_15160) | maiA | 3273293..3273943 (+) | 651 | WP_078222380.1 | maleylacetoacetate isomerase | - |
| ACEQ39_RS15165 (ACEQ39_15165) | - | 3273940..3274578 (+) | 639 | WP_078222381.1 | LysE/ArgO family amino acid transporter | - |
| ACEQ39_RS15170 (ACEQ39_15170) | pilA | 3274575..3275702 (-) | 1128 | WP_013213631.1 | signal recognition particle-docking protein FtsY | Machinery gene |
| ACEQ39_RS15175 (ACEQ39_15175) | - | 3275763..3277256 (+) | 1494 | WP_078222382.1 | pitrilysin family protein | - |
| ACEQ39_RS15180 (ACEQ39_15180) | - | 3277256..3278599 (+) | 1344 | WP_013213629.1 | pitrilysin family protein | - |
| ACEQ39_RS15185 (ACEQ39_15185) | rsmD | 3278679..3279326 (+) | 648 | WP_075465409.1 | 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD | - |
| ACEQ39_RS15190 (ACEQ39_15190) | coaD | 3279522..3280028 (+) | 507 | WP_003262550.1 | pantetheine-phosphate adenylyltransferase | - |
| ACEQ39_RS15195 (ACEQ39_15195) | - | 3280079..3280327 (+) | 249 | WP_078222383.1 | YfhL family 4Fe-4S dicluster ferredoxin | - |
Sequence
Protein
Download Length: 375 a.a. Molecular weight: 39819.04 Da Isoelectric Point: 6.1635
>NTDB_id=1045496 ACEQ39_RS15170 WP_013213631.1 3274575..3275702(-) (pilA) [Ralstonia syzygii subsp. celebesensis strain NCPPB 3725]
MFSFWKKRKAEPQPAAEPVPPAAAPEAVQAPAPAPVASPAPAPAPVAVPDTPATPAALDMQADDIETVPTPPVVEQARKG
WMSRLRSGLSKTSKGLTTLFVGVKVDEALFEELETALLMADAGVDATEYLLGELRRRVKAQRIETAEGVKTALRDLLIEL
LHPLEKTMVLGREQPTVIMIAGVNGAGKTTSIGKLCKHFQTYGQSVLLAAGDTFRAAAREQLVIWGQRNNVTVVAQESGD
PAAVIFDAVNAARARGIDIVMADTAGRLPTQLHLMEELKKVRRVIGKAMATAPHETLLVIDANTGQNALAQVKAFDDTLG
LTGLIITKLDGTAKGGILAAIARQRPVPVYFIGVGEQVEDLQPFSAREFADALLG
MFSFWKKRKAEPQPAAEPVPPAAAPEAVQAPAPAPVASPAPAPAPVAVPDTPATPAALDMQADDIETVPTPPVVEQARKG
WMSRLRSGLSKTSKGLTTLFVGVKVDEALFEELETALLMADAGVDATEYLLGELRRRVKAQRIETAEGVKTALRDLLIEL
LHPLEKTMVLGREQPTVIMIAGVNGAGKTTSIGKLCKHFQTYGQSVLLAAGDTFRAAAREQLVIWGQRNNVTVVAQESGD
PAAVIFDAVNAARARGIDIVMADTAGRLPTQLHLMEELKKVRRVIGKAMATAPHETLLVIDANTGQNALAQVKAFDDTLG
LTGLIITKLDGTAKGGILAAIARQRPVPVYFIGVGEQVEDLQPFSAREFADALLG
Nucleotide
Download Length: 1128 bp
>NTDB_id=1045496 ACEQ39_RS15170 WP_013213631.1 3274575..3275702(-) (pilA) [Ralstonia syzygii subsp. celebesensis strain NCPPB 3725]
ATGTTTAGTTTCTGGAAGAAGCGCAAGGCAGAGCCCCAGCCGGCTGCCGAACCGGTGCCGCCCGCCGCCGCACCTGAAGC
GGTACAGGCTCCAGCCCCGGCCCCGGTTGCCTCCCCTGCACCTGCACCCGCCCCGGTTGCCGTGCCGGATACACCGGCCA
CGCCGGCTGCGCTGGACATGCAGGCCGACGATATCGAGACCGTGCCGACGCCGCCCGTGGTGGAGCAGGCGCGCAAGGGC
TGGATGTCGCGCCTGCGCTCGGGCCTGTCGAAGACCAGCAAGGGCCTGACCACGCTGTTCGTCGGCGTGAAGGTGGACGA
GGCGCTGTTCGAGGAGCTGGAAACCGCGCTGCTGATGGCCGATGCAGGCGTCGATGCCACCGAATACCTGCTGGGCGAAC
TGCGCCGCCGTGTGAAAGCCCAGCGCATCGAGACCGCCGAGGGCGTGAAGACCGCGCTGCGCGACCTGCTCATCGAGCTG
CTGCATCCGCTGGAAAAGACCATGGTGCTCGGCCGCGAGCAGCCGACGGTGATCATGATCGCGGGCGTCAACGGCGCCGG
CAAGACCACCAGCATCGGCAAGCTGTGCAAGCACTTCCAGACCTACGGGCAATCCGTGCTGCTGGCAGCGGGCGACACGT
TCCGTGCTGCCGCGCGCGAGCAGTTGGTGATCTGGGGCCAGCGCAACAACGTGACCGTGGTGGCGCAGGAATCGGGCGAC
CCGGCCGCCGTGATCTTCGACGCGGTGAACGCGGCGCGCGCCCGCGGCATCGATATCGTCATGGCCGACACCGCCGGCCG
CCTGCCGACCCAGCTGCACCTGATGGAAGAACTGAAGAAGGTGCGCCGCGTGATCGGCAAGGCGATGGCGACGGCGCCGC
ACGAGACGTTGCTGGTGATCGACGCCAACACCGGCCAGAATGCGCTGGCGCAGGTGAAAGCCTTCGACGATACGCTCGGC
CTGACCGGCCTGATCATCACCAAGCTGGACGGCACCGCCAAGGGCGGCATCCTGGCCGCCATCGCGCGGCAGCGGCCTGT
ACCGGTGTATTTCATCGGCGTGGGCGAACAGGTGGAAGACCTGCAGCCGTTCTCCGCACGCGAATTCGCCGACGCGCTAC
TGGGCTAG
ATGTTTAGTTTCTGGAAGAAGCGCAAGGCAGAGCCCCAGCCGGCTGCCGAACCGGTGCCGCCCGCCGCCGCACCTGAAGC
GGTACAGGCTCCAGCCCCGGCCCCGGTTGCCTCCCCTGCACCTGCACCCGCCCCGGTTGCCGTGCCGGATACACCGGCCA
CGCCGGCTGCGCTGGACATGCAGGCCGACGATATCGAGACCGTGCCGACGCCGCCCGTGGTGGAGCAGGCGCGCAAGGGC
TGGATGTCGCGCCTGCGCTCGGGCCTGTCGAAGACCAGCAAGGGCCTGACCACGCTGTTCGTCGGCGTGAAGGTGGACGA
GGCGCTGTTCGAGGAGCTGGAAACCGCGCTGCTGATGGCCGATGCAGGCGTCGATGCCACCGAATACCTGCTGGGCGAAC
TGCGCCGCCGTGTGAAAGCCCAGCGCATCGAGACCGCCGAGGGCGTGAAGACCGCGCTGCGCGACCTGCTCATCGAGCTG
CTGCATCCGCTGGAAAAGACCATGGTGCTCGGCCGCGAGCAGCCGACGGTGATCATGATCGCGGGCGTCAACGGCGCCGG
CAAGACCACCAGCATCGGCAAGCTGTGCAAGCACTTCCAGACCTACGGGCAATCCGTGCTGCTGGCAGCGGGCGACACGT
TCCGTGCTGCCGCGCGCGAGCAGTTGGTGATCTGGGGCCAGCGCAACAACGTGACCGTGGTGGCGCAGGAATCGGGCGAC
CCGGCCGCCGTGATCTTCGACGCGGTGAACGCGGCGCGCGCCCGCGGCATCGATATCGTCATGGCCGACACCGCCGGCCG
CCTGCCGACCCAGCTGCACCTGATGGAAGAACTGAAGAAGGTGCGCCGCGTGATCGGCAAGGCGATGGCGACGGCGCCGC
ACGAGACGTTGCTGGTGATCGACGCCAACACCGGCCAGAATGCGCTGGCGCAGGTGAAAGCCTTCGACGATACGCTCGGC
CTGACCGGCCTGATCATCACCAAGCTGGACGGCACCGCCAAGGGCGGCATCCTGGCCGCCATCGCGCGGCAGCGGCCTGT
ACCGGTGTATTTCATCGGCGTGGGCGAACAGGTGGAAGACCTGCAGCCGTTCTCCGCACGCGAATTCGCCGACGCGCTAC
TGGGCTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Neisseria gonorrhoeae MS11 |
62.951 |
81.333 |
0.512 |