Detailed information
Bioinformatically predicted
Overview
| Name | comL/pilP | Type | Machinery gene |
| Locus tag | QSK41_RS02535 | Genome accession | NZ_OX638701 |
| Coordinates | 561266..561790 (-) | Length | 174 a.a. |
| NCBI ID | WP_003095836.1 | Uniprot ID | G3XCX7 |
| Organism | Pseudomonas aeruginosa strain 4782MK isolate 4782MK | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 556266..566790
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QSK41_RS02520 (PAER4782_02535) | aroB | 557382..558488 (-) | 1107 | WP_003162482.1 | 3-dehydroquinate synthase | - |
| QSK41_RS02525 (PAER4782_02540) | aroK | 558538..559056 (-) | 519 | WP_003095833.1 | shikimate kinase AroK | - |
| QSK41_RS02530 (PAER4782_02545) | pilQ | 559068..561212 (-) | 2145 | WP_003146401.1 | type 4a pilus secretin PilQ | Machinery gene |
| QSK41_RS02535 (PAER4782_02550) | comL/pilP | 561266..561790 (-) | 525 | WP_003095836.1 | type 4a pilus biogenesis lipoprotein PilP | Machinery gene |
| QSK41_RS02540 (PAER4782_02555) | pilO | 561787..562410 (-) | 624 | WP_003103268.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| QSK41_RS02545 (PAER4782_02560) | pilN | 562407..563003 (-) | 597 | WP_003095839.1 | type 4a pilus biogenesis protein PilN | Machinery gene |
| QSK41_RS02550 (PAER4782_02565) | pilM | 563003..564067 (-) | 1065 | WP_003110888.1 | type IV pilus assembly protein PilM | Machinery gene |
| QSK41_RS02555 (PAER4782_02575) | - | 564252..566720 (+) | 2469 | WP_003114576.1 | penicillin-binding protein 1A | - |
Sequence
Protein
Download Length: 174 a.a. Molecular weight: 19053.84 Da Isoelectric Point: 9.4114
>NTDB_id=1045376 QSK41_RS02535 WP_003095836.1 561266..561790(-) (comL/pilP) [Pseudomonas aeruginosa strain 4782MK isolate 4782MK]
MRARLILSSLLLASLAGCGGGSDFADLQSYMDEVRARPKGTIEPLPKFQPYEAFTYSAASLRSPFQPPVKIDLTVRQKGN
KVIKPDETRVKQFLEGFNIETFEMVGTLSNAQGTFALVKGAGGVHRVRVGDYLGRNDGKVVGISEGKIDVIEIVPDGEGN
WLERPRSLTLKERS
MRARLILSSLLLASLAGCGGGSDFADLQSYMDEVRARPKGTIEPLPKFQPYEAFTYSAASLRSPFQPPVKIDLTVRQKGN
KVIKPDETRVKQFLEGFNIETFEMVGTLSNAQGTFALVKGAGGVHRVRVGDYLGRNDGKVVGISEGKIDVIEIVPDGEGN
WLERPRSLTLKERS
Nucleotide
Download Length: 525 bp
>NTDB_id=1045376 QSK41_RS02535 WP_003095836.1 561266..561790(-) (comL/pilP) [Pseudomonas aeruginosa strain 4782MK isolate 4782MK]
ATGAGAGCCCGCCTGATTCTGAGCAGCCTGCTGCTCGCCAGCCTGGCCGGATGCGGCGGCGGTTCCGATTTCGCCGATCT
GCAGTCCTACATGGACGAGGTTCGCGCCCGGCCCAAGGGCACCATCGAGCCGTTGCCGAAGTTCCAGCCGTACGAGGCCT
TCACCTATAGCGCCGCGTCGCTACGCAGCCCGTTCCAGCCGCCGGTGAAGATCGACCTGACCGTGCGGCAGAAGGGCAAC
AAGGTGATCAAGCCCGACGAGACGCGGGTCAAGCAGTTCCTGGAAGGCTTCAACATCGAGACCTTCGAGATGGTCGGCAC
CCTGTCCAACGCCCAGGGCACCTTCGCCCTGGTGAAGGGCGCGGGTGGCGTGCACCGGGTGAGGGTCGGGGACTACCTGG
GGCGCAACGACGGCAAGGTCGTCGGCATCAGCGAAGGAAAAATAGACGTGATCGAAATCGTTCCTGACGGAGAGGGGAAC
TGGCTGGAGCGTCCGCGCAGCCTGACTCTCAAGGAACGCTCCTGA
ATGAGAGCCCGCCTGATTCTGAGCAGCCTGCTGCTCGCCAGCCTGGCCGGATGCGGCGGCGGTTCCGATTTCGCCGATCT
GCAGTCCTACATGGACGAGGTTCGCGCCCGGCCCAAGGGCACCATCGAGCCGTTGCCGAAGTTCCAGCCGTACGAGGCCT
TCACCTATAGCGCCGCGTCGCTACGCAGCCCGTTCCAGCCGCCGGTGAAGATCGACCTGACCGTGCGGCAGAAGGGCAAC
AAGGTGATCAAGCCCGACGAGACGCGGGTCAAGCAGTTCCTGGAAGGCTTCAACATCGAGACCTTCGAGATGGTCGGCAC
CCTGTCCAACGCCCAGGGCACCTTCGCCCTGGTGAAGGGCGCGGGTGGCGTGCACCGGGTGAGGGTCGGGGACTACCTGG
GGCGCAACGACGGCAAGGTCGTCGGCATCAGCGAAGGAAAAATAGACGTGATCGAAATCGTTCCTGACGGAGAGGGGAAC
TGGCTGGAGCGTCCGCGCAGCCTGACTCTCAAGGAACGCTCCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comL/pilP | Acinetobacter baylyi ADP1 |
36.416 |
99.425 |
0.362 |