Detailed information    

insolico Bioinformatically predicted

Overview


Name   kpsS   Type   Regulator
Locus tag   ACEN40_RS03285 Genome accession   NZ_CP168724
Coordinates   623421..624605 (+) Length   394 a.a.
NCBI ID   WP_158334930.1    Uniprot ID   -
Organism   Campylobacter bilis strain 64     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 618421..629605
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACEN40_RS03260 (ACEN40_03260) - 618462..619266 (-) 805 Protein_625 AAC(3) family N-acetyltransferase -
  ACEN40_RS03265 (ACEN40_03265) - 619477..620517 (+) 1041 WP_158334926.1 acyl carrier protein -
  ACEN40_RS03270 (ACEN40_03270) - 620545..620769 (-) 225 WP_158334927.1 phosphopantetheine-binding protein -
  ACEN40_RS03275 (ACEN40_03275) - 620858..621364 (+) 507 WP_158334928.1 adenylyl-sulfate kinase -
  ACEN40_RS03280 (ACEN40_03280) - 621361..623424 (+) 2064 WP_158334929.1 capsular polysaccharide biosynthesis protein -
  ACEN40_RS03285 (ACEN40_03285) kpsS 623421..624605 (+) 1185 WP_158334930.1 capsule biosynthesis protein Regulator
  ACEN40_RS03290 (ACEN40_03290) - 624677..625795 (+) 1119 WP_158334931.1 DUF829 domain-containing protein -
  ACEN40_RS03295 (ACEN40_03295) - 625792..627162 (+) 1371 WP_158334932.1 cytochrome P450 -
  ACEN40_RS03300 (ACEN40_03300) - 627159..627575 (+) 417 WP_158334933.1 hypothetical protein -
  ACEN40_RS03305 (ACEN40_03305) acpS 627577..627924 (-) 348 WP_158334934.1 holo-ACP synthase -
  ACEN40_RS03310 (ACEN40_03310) fliL 627924..628460 (-) 537 WP_158334935.1 flagellar basal body-associated protein FliL -

Sequence


Protein


Download         Length: 394 a.a.        Molecular weight: 46895.58 Da        Isoelectric Point: 9.8631

>NTDB_id=1045282 ACEN40_RS03285 WP_158334930.1 623421..624605(+) (kpsS) [Campylobacter bilis strain 64]
MRFGDKIKKEFSGKNVLLLQGPVGNFFHILAMKMKENQTKVFKLNFNGGDFFFYPSGVRCKCNEKELENFYESFLEEKKI
NAIVMYNDCRIVHAKAIEVAKRLGIEIWIFEEGYLRPYCITFEKDGVNANSSLPRDKNFYLCQYIYNKDSIKEIPGSFKF
MAFDAFLYWLFAFVLAPFFNNKLHHRTLYPFEFLFWFRSLYRKYLYKITEKTINKKIYNLEKKYFLAILQVYSDTQIKYH
YKKSIEYFIEEIILSFANHARAKSYLVFKHHPMDRGYKNYAKLIQKLSQKYHVEGRVLYVHDTHLPTLLKRALGCITINS
TVGFSAILEGCPTKVCGDAFYDFEGLTYPKKLQFFWREAHAYKPNSALVRNFKKYLLQSNQFNGNFYKNSFLNK

Nucleotide


Download         Length: 1185 bp        

>NTDB_id=1045282 ACEN40_RS03285 WP_158334930.1 623421..624605(+) (kpsS) [Campylobacter bilis strain 64]
ATGAGATTTGGCGATAAGATTAAAAAAGAATTTAGCGGTAAGAATGTTTTGCTTTTGCAAGGGCCTGTAGGAAATTTCTT
TCATATTCTTGCTATGAAAATGAAGGAAAATCAAACTAAGGTTTTTAAGCTAAATTTTAATGGGGGAGATTTTTTTTTCT
ATCCAAGTGGAGTAAGATGTAAATGTAATGAAAAAGAACTTGAAAATTTTTATGAAAGCTTTCTAGAAGAGAAAAAAATT
AATGCTATTGTGATGTATAATGATTGTCGTATTGTGCATGCAAAGGCTATTGAAGTGGCTAAGCGTTTAGGTATTGAAAT
TTGGATTTTTGAAGAGGGTTATTTAAGGCCTTATTGTATTACTTTTGAAAAAGATGGGGTGAATGCGAATTCTTCTTTGC
CTCGTGATAAAAATTTCTATCTTTGTCAATACATTTATAATAAAGACAGCATAAAAGAAATTCCTGGTAGTTTTAAATTT
ATGGCTTTTGATGCATTTTTGTATTGGTTATTTGCTTTTGTTTTAGCTCCTTTTTTTAATAATAAGCTTCATCATCGCAC
TTTGTATCCTTTTGAGTTTTTATTTTGGTTTCGATCTTTATATAGAAAATATCTTTATAAAATCACTGAAAAAACAATCA
ATAAAAAAATTTATAATTTAGAAAAAAAATATTTTTTAGCCATTTTGCAAGTTTATAGCGATACGCAAATTAAGTATCAT
TATAAAAAAAGTATAGAATATTTTATAGAAGAGATCATACTTTCTTTTGCAAATCATGCTAGAGCTAAGTCTTATCTTGT
GTTTAAGCATCATCCTATGGATAGAGGATATAAAAATTATGCAAAACTAATTCAAAAGCTAAGTCAAAAATATCATGTAG
AAGGGAGGGTTTTATATGTGCACGATACGCATTTGCCCACCCTTTTAAAAAGAGCTTTAGGTTGTATTACTATTAATTCT
ACAGTAGGCTTTAGTGCTATTTTAGAAGGTTGCCCGACTAAGGTTTGTGGAGATGCTTTTTATGATTTTGAAGGCTTGAC
TTATCCTAAGAAACTTCAGTTTTTTTGGCGAGAAGCTCATGCTTATAAGCCTAATTCTGCTTTAGTACGCAATTTTAAAA
AATATCTTTTACAAAGCAATCAATTTAATGGTAATTTTTATAAAAATTCTTTTTTAAACAAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kpsS Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

87.563

100

0.876


Multiple sequence alignment