Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | ACEN41_RS04645 | Genome accession | NZ_CP168723 |
| Coordinates | 859490..859807 (+) | Length | 105 a.a. |
| NCBI ID | WP_193699218.1 | Uniprot ID | - |
| Organism | Campylobacter bilis strain 63 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 854490..864807
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACEN41_RS04620 (ACEN41_04620) | rpsR | 854869..855129 (+) | 261 | WP_158334549.1 | 30S ribosomal protein S18 | - |
| ACEN41_RS04625 (ACEN41_04625) | lon | 855180..857558 (-) | 2379 | WP_158334548.1 | endopeptidase La | - |
| ACEN41_RS04630 (ACEN41_04630) | bamD | 857576..858222 (-) | 647 | Protein_892 | outer membrane protein assembly factor BamD | - |
| ACEN41_RS04635 (ACEN41_04635) | fliW | 858389..858778 (+) | 390 | WP_158334546.1 | flagellar assembly protein FliW | - |
| ACEN41_RS04640 (ACEN41_04640) | proC | 858778..859509 (+) | 732 | WP_158334595.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| ACEN41_RS04645 (ACEN41_04645) | ctsT | 859490..859807 (+) | 318 | WP_193699218.1 | hypothetical protein | Machinery gene |
| ACEN41_RS04650 (ACEN41_04650) | - | 859804..860466 (+) | 663 | WP_158334545.1 | hypothetical protein | - |
| ACEN41_RS04655 (ACEN41_04655) | - | 860463..860914 (+) | 452 | Protein_897 | hypothetical protein | - |
| ACEN41_RS04660 (ACEN41_04660) | - | 860911..861540 (-) | 630 | WP_158334594.1 | uroporphyrinogen-III synthase | - |
| ACEN41_RS04665 (ACEN41_04665) | thiE | 861518..862150 (-) | 633 | WP_158334543.1 | thiamine phosphate synthase | - |
| ACEN41_RS04670 (ACEN41_04670) | thiD | 862140..862949 (-) | 810 | WP_158334542.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| ACEN41_RS04675 (ACEN41_04675) | - | 862946..863632 (-) | 687 | WP_203121189.1 | 3-methyladenine DNA glycosylase | - |
Sequence
Protein
Download Length: 105 a.a. Molecular weight: 12945.86 Da Isoelectric Point: 8.3968
>NTDB_id=1045268 ACEN41_RS04645 WP_193699218.1 859490..859807(+) (ctsT) [Campylobacter bilis strain 63]
MLAILNEKSLYIYRINPCYDNPIFNFCWHYLYYTHLYKNHENLNIIERLYKLQDRLYEKASLKTTLIQSSNLQPINLQEQ
IVKDGAFEFKKLYFQNQNYNVYFKE
MLAILNEKSLYIYRINPCYDNPIFNFCWHYLYYTHLYKNHENLNIIERLYKLQDRLYEKASLKTTLIQSSNLQPINLQEQ
IVKDGAFEFKKLYFQNQNYNVYFKE
Nucleotide
Download Length: 318 bp
>NTDB_id=1045268 ACEN41_RS04645 WP_193699218.1 859490..859807(+) (ctsT) [Campylobacter bilis strain 63]
GTGCTAGCAATACTAAATGAAAAAAGCCTTTATATTTATAGAATTAATCCATGCTATGATAATCCTATCTTTAATTTTTG
TTGGCATTATTTATATTATACTCATCTTTATAAAAACCACGAGAATTTAAACATTATTGAAAGACTTTACAAACTTCAAG
ATCGATTATACGAAAAAGCAAGTTTAAAAACCACCCTAATACAAAGCTCAAATTTACAGCCCATAAACCTACAAGAACAA
ATTGTCAAAGATGGTGCATTTGAATTTAAAAAACTATACTTTCAAAATCAAAACTACAATGTTTACTTCAAAGAATGA
GTGCTAGCAATACTAAATGAAAAAAGCCTTTATATTTATAGAATTAATCCATGCTATGATAATCCTATCTTTAATTTTTG
TTGGCATTATTTATATTATACTCATCTTTATAAAAACCACGAGAATTTAAACATTATTGAAAGACTTTACAAACTTCAAG
ATCGATTATACGAAAAAGCAAGTTTAAAAACCACCCTAATACAAAGCTCAAATTTACAGCCCATAAACCTACAAGAACAA
ATTGTCAAAGATGGTGCATTTGAATTTAAAAAACTATACTTTCAAAATCAAAACTACAATGTTTACTTCAAAGAATGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
66.25 |
76.19 |
0.505 |