Detailed information    

insolico Bioinformatically predicted

Overview

Name   agrA   Type   Regulator
Locus tag   ACEOOE_RS10240 Genome accession   NZ_CP168717
Coordinates   2056223..2056939 (+) Length   238 a.a.
NCBI ID   WP_000688492.1    Uniprot ID   A0A7U7IEW1
Organism   Staphylococcus aureus strain C96     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2051223..2061939
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACEOOE_RS10210 (ACEOOE_10210) - 2051440..2052066 (+) 627 WP_000522381.1 nitroreductase family protein -
  ACEOOE_RS10215 (ACEOOE_10215) - 2052427..2053212 (+) 786 WP_000867951.1 carbon-nitrogen family hydrolase -
  ACEOOE_RS10220 hld 2053812..2053892 (-) 81 WP_000046022.1 delta-hemolysin -
  ACEOOE_RS10225 (ACEOOE_10225) - 2054182..2054745 (+) 564 WP_001105696.1 accessory gene regulator AgrB -
  ACEOOE_RS10230 (ACEOOE_10230) agrD 2054748..2054891 (+) 144 WP_001094921.1 cyclic lactone autoinducer peptide AgrD -
  ACEOOE_RS10235 (ACEOOE_10235) agrC 2054921..2056204 (+) 1284 WP_000447888.1 quorum-sensing sensor histidine kinase AgrC -
  ACEOOE_RS10240 (ACEOOE_10240) agrA 2056223..2056939 (+) 717 WP_000688492.1 quorum-sensing response regulator AgrA Regulator
  ACEOOE_RS10245 (ACEOOE_10245) - 2057011..2057120 (+) 110 Protein_1983 hypothetical protein -
  ACEOOE_RS10250 (ACEOOE_10250) - 2057308..2058267 (-) 960 WP_001253312.1 carbohydrate kinase -
  ACEOOE_RS10255 (ACEOOE_10255) - 2058264..2059748 (-) 1485 WP_000141431.1 sucrose-6-phosphate hydrolase -
  ACEOOE_RS10260 (ACEOOE_10260) - 2059897..2060847 (-) 951 WP_000790331.1 LacI family DNA-binding transcriptional regulator -

Sequence

Protein


Download         Length: 238 a.a.        Molecular weight: 27905.90 Da        Isoelectric Point: 6.0927

>NTDB_id=1045256 ACEOOE_RS10240 WP_000688492.1 2056223..2056939(+) (agrA) [Staphylococcus aureus strain C96]
MKIFICEDDPKQRENMVTIIKNYIMIEEKPMEIALATDNPYEVLEQAKNMNDIGCYFLDIQLSTDINGIKLGSEIRKHDP
VGNIIFVTSHSELTYLTFVYKVAAMDFIFKDDPAELRTRIIDCLETAHTRLQLLSKDNSVETIELKRGSNSVYVQYDDIM
FFESSTKSHRLIAHLDNRQIEFYGNLKELSQLDDRFFRCHNSFVVNRHNIESIDSKERIVYFKNKEHCYASVRNVKKI

Nucleotide


Download         Length: 717 bp        

>NTDB_id=1045256 ACEOOE_RS10240 WP_000688492.1 2056223..2056939(+) (agrA) [Staphylococcus aureus strain C96]
ATGAAAATTTTCATTTGCGAAGACGATCCAAAACAAAGAGAAAACATGGTTACCATTATTAAAAATTATATAATGATAGA
AGAAAAGCCTATGGAAATTGCCCTCGCAACTGATAATCCTTATGAGGTGCTTGAGCAAGCTAAAAATATGAATGACATAG
GCTGTTACTTTTTAGATATTCAACTTTCAACTGATATTAATGGTATCAAATTAGGCAGTGAAATTCGTAAGCATGACCCA
GTTGGTAACATTATTTTCGTTACGAGTCACAGTGAACTTACCTATTTAACATTTGTCTACAAAGTTGCAGCGATGGATTT
TATTTTTAAAGATGATCCAGCAGAATTAAGAACTCGAATTATAGATTGTTTAGAAACTGCACATACACGCTTACAATTGT
TGTCTAAAGATAATAGCGTTGAAACGATTGAATTAAAACGTGGCAGTAATTCAGTGTATGTTCAATATGATGATATTATG
TTTTTTGAATCATCAACAAAATCTCACAGACTCATTGCCCATTTAGATAACCGTCAAATTGAATTTTATGGTAATTTAAA
AGAACTGAGTCAATTAGATGATCGTTTCTTTAGATGTCATAATAGCTTTGTCGTCAATCGCCATAATATTGAATCTATAG
ATTCGAAAGAGCGAATTGTCTATTTTAAAAATAAAGAACACTGCTATGCATCGGTGAGAAACGTTAAAAAAATATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-120)

LytTr DNA-binding domain (LytTR)

(151-237)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7IEW1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  agrA Staphylococcus aureus N315

100

100

1

Multiple sequence alignment