Detailed information
Bioinformatically predicted
Overview
| Name | braR | Type | Regulator |
| Locus tag | ACEOOE_RS01960 | Genome accession | NZ_CP168717 |
| Coordinates | 426925..427599 (+) | Length | 224 a.a. |
| NCBI ID | WP_000866106.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain C96 | ||
| Function | promote expression of competence genes (predicted from homology) Competence regulation |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| IScluster/Tn | 415000..434342 | 426925..427599 | within | 0 |
Gene organization within MGE regions
Location: 415000..434342
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACEOOE_RS01900 (ACEOOE_01900) | - | 415000..415674 (-) | 675 | WP_001105987.1 | IS6-like element IS257 family transposase | - |
| ACEOOE_RS01905 (ACEOOE_01905) | - | 415740..416336 (+) | 597 | WP_000275959.1 | gamma-glutamyltransferase | - |
| ACEOOE_RS01910 (ACEOOE_01910) | - | 416585..417442 (+) | 858 | WP_000162894.1 | YitT family protein | - |
| ACEOOE_RS01915 (ACEOOE_01915) | - | 417592..418203 (-) | 612 | WP_000635275.1 | recombinase family protein | - |
| ACEOOE_RS01920 (ACEOOE_01920) | - | 418689..419588 (-) | 900 | WP_000196697.1 | Mph(C) family macrolide 2'-phosphotransferase | - |
| ACEOOE_RS01925 (ACEOOE_01925) | msr(A) | 419687..421153 (-) | 1467 | WP_000438874.1 | ABC-F type ribosomal protection protein Msr(A) | - |
| ACEOOE_RS01930 (ACEOOE_01930) | - | 421627..422301 (+) | 675 | WP_001105960.1 | IS6 family transposase | - |
| ACEOOE_RS01935 (ACEOOE_01935) | - | 422595..422768 (-) | 174 | WP_000044738.1 | hypothetical protein | - |
| ACEOOE_RS01940 (ACEOOE_01940) | - | 422812..423432 (-) | 621 | WP_000941203.1 | LysE/ArgO family amino acid transporter | - |
| ACEOOE_RS01945 (ACEOOE_01945) | - | 423437..424408 (-) | 972 | WP_000053810.1 | fatty acid desaturase family protein | - |
| ACEOOE_RS01950 (ACEOOE_01950) | - | 424507..425919 (+) | 1413 | WP_000526300.1 | PLP-dependent aminotransferase family protein | - |
| ACEOOE_RS01955 (ACEOOE_01955) | - | 426111..426785 (+) | 675 | WP_001105960.1 | IS6 family transposase | - |
| ACEOOE_RS01960 (ACEOOE_01960) | braR | 426925..427599 (+) | 675 | WP_000866106.1 | response regulator transcription factor | Regulator |
| ACEOOE_RS01965 (ACEOOE_01965) | - | 427596..428477 (+) | 882 | Protein_390 | sensor histidine kinase | - |
| ACEOOE_RS01970 (ACEOOE_01970) | - | 428593..429522 (+) | 930 | WP_000793446.1 | ABC transporter ATP-binding protein | - |
| ACEOOE_RS01975 (ACEOOE_01975) | - | 429515..430252 (+) | 738 | WP_000369394.1 | ABC transporter permease | - |
| ACEOOE_RS01980 (ACEOOE_01980) | - | 430266..430454 (+) | 189 | Protein_393 | undecaprenyl-diphosphate phosphatase | - |
| ACEOOE_RS01985 (ACEOOE_01985) | - | 430499..431173 (+) | 675 | WP_001105960.1 | IS6 family transposase | - |
| ACEOOE_RS01990 (ACEOOE_01990) | - | 431314..431949 (+) | 636 | Protein_395 | aminoglycoside 6-adenylyltransferase | - |
| ACEOOE_RS01995 (ACEOOE_01995) | sat4 | 431946..432476 (+) | 531 | Protein_396 | streptothricin N-acetyltransferase Sat4 | - |
| ACEOOE_RS02000 (ACEOOE_02000) | aph(3')-IIIa | 432569..433363 (+) | 795 | WP_001096887.1 | aminoglycoside O-phosphotransferase APH(3')-IIIa | - |
| ACEOOE_RS02005 (ACEOOE_02005) | - | 433668..434342 (-) | 675 | WP_001105987.1 | IS6-like element IS257 family transposase | - |
Sequence
Protein
Download Length: 224 a.a. Molecular weight: 25839.93 Da Isoelectric Point: 4.9884
>NTDB_id=1045221 ACEOOE_RS01960 WP_000866106.1 426925..427599(+) (braR) [Staphylococcus aureus strain C96]
MKVLIVEDDLVIGKMLAEELKKWQLEPILIEGFNHVMDAFNTNAPELVLLDINLPAFNGYHWCQEIRKVSTVPIIFISSR
NDSMDQVMAMQMGADDFIEKPFNMTVTITKIQALLRRTYDFTTQVNNLTVDDCELLLDAAKLKFNEETIDLTHTELQIMH
SLFQNKGKFVSRNALIEKCWESEHFIDDNTLAVNITRLRKKLQKLGLTDFIETKKNVGYRVGDV
MKVLIVEDDLVIGKMLAEELKKWQLEPILIEGFNHVMDAFNTNAPELVLLDINLPAFNGYHWCQEIRKVSTVPIIFISSR
NDSMDQVMAMQMGADDFIEKPFNMTVTITKIQALLRRTYDFTTQVNNLTVDDCELLLDAAKLKFNEETIDLTHTELQIMH
SLFQNKGKFVSRNALIEKCWESEHFIDDNTLAVNITRLRKKLQKLGLTDFIETKKNVGYRVGDV
Nucleotide
Download Length: 675 bp
>NTDB_id=1045221 ACEOOE_RS01960 WP_000866106.1 426925..427599(+) (braR) [Staphylococcus aureus strain C96]
ATGAAAGTATTAATCGTAGAGGATGACTTAGTTATCGGGAAGATGCTTGCTGAAGAGCTCAAGAAGTGGCAGCTAGAACC
GATCTTAATAGAAGGTTTCAATCATGTAATGGATGCCTTCAACACGAATGCACCGGAACTTGTGTTACTCGATATTAATT
TACCTGCCTTCAATGGTTATCACTGGTGTCAGGAGATTCGTAAAGTTTCTACTGTACCGATTATATTTATTAGTTCGCGT
AACGACAGTATGGATCAAGTAATGGCGATGCAGATGGGTGCGGATGATTTCATTGAGAAGCCATTTAATATGACTGTTAC
AATTACTAAGATTCAAGCACTATTACGCCGCACGTATGATTTCACCACTCAAGTTAATAATTTAACAGTAGATGATTGCG
AGTTACTACTTGATGCAGCAAAGCTTAAATTTAATGAAGAAACCATAGACCTGACACACACTGAATTGCAAATCATGCAT
AGCTTATTCCAGAACAAGGGCAAATTCGTCAGTCGTAATGCGTTAATCGAAAAATGCTGGGAATCAGAACACTTCATTGA
TGACAATACGCTTGCTGTCAACATTACACGTTTACGCAAAAAGCTACAAAAACTAGGACTTACAGATTTTATCGAAACGA
AGAAAAATGTCGGATATCGTGTAGGTGACGTATGA
ATGAAAGTATTAATCGTAGAGGATGACTTAGTTATCGGGAAGATGCTTGCTGAAGAGCTCAAGAAGTGGCAGCTAGAACC
GATCTTAATAGAAGGTTTCAATCATGTAATGGATGCCTTCAACACGAATGCACCGGAACTTGTGTTACTCGATATTAATT
TACCTGCCTTCAATGGTTATCACTGGTGTCAGGAGATTCGTAAAGTTTCTACTGTACCGATTATATTTATTAGTTCGCGT
AACGACAGTATGGATCAAGTAATGGCGATGCAGATGGGTGCGGATGATTTCATTGAGAAGCCATTTAATATGACTGTTAC
AATTACTAAGATTCAAGCACTATTACGCCGCACGTATGATTTCACCACTCAAGTTAATAATTTAACAGTAGATGATTGCG
AGTTACTACTTGATGCAGCAAAGCTTAAATTTAATGAAGAAACCATAGACCTGACACACACTGAATTGCAAATCATGCAT
AGCTTATTCCAGAACAAGGGCAAATTCGTCAGTCGTAATGCGTTAATCGAAAAATGCTGGGAATCAGAACACTTCATTGA
TGACAATACGCTTGCTGTCAACATTACACGTTTACGCAAAAAGCTACAAAAACTAGGACTTACAGATTTTATCGAAACGA
AGAAAAATGTCGGATATCGTGTAGGTGACGTATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| braR | Staphylococcus aureus N315 |
66.516 |
98.661 |
0.656 |