Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | R8917_RS05755 | Genome accession | NZ_AP028344 |
| Coordinates | 1104382..1104684 (+) | Length | 100 a.a. |
| NCBI ID | WP_317725436.1 | Uniprot ID | - |
| Organism | Campylobacter jejuni strain BCH-10331 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1099382..1109684
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R8917_RS05730 (B10331_11170) | rpsR | 1099745..1100005 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| R8917_RS05735 (B10331_11180) | lon | 1100065..1102440 (-) | 2376 | WP_249605703.1 | endopeptidase La | - |
| R8917_RS05740 (B10331_11190) | bamD | 1102457..1103104 (-) | 648 | WP_218983046.1 | outer membrane protein assembly factor BamD | - |
| R8917_RS05745 (B10331_11200) | fliW | 1103265..1103654 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| R8917_RS05750 (B10331_11210) | proC | 1103654..1104385 (+) | 732 | WP_002854026.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| R8917_RS05755 (B10331_11220) | ctsT | 1104382..1104684 (+) | 303 | WP_317725436.1 | hypothetical protein | Machinery gene |
| R8917_RS05760 (B10331_11230) | - | 1104681..1105343 (+) | 663 | WP_002866103.1 | hypothetical protein | - |
| R8917_RS05765 (B10331_11240) | - | 1105340..1105792 (+) | 453 | WP_002869049.1 | hypothetical protein | - |
| R8917_RS05770 (B10331_11250) | hemD | 1105789..1106418 (-) | 630 | WP_249605702.1 | uroporphyrinogen-III synthase | - |
| R8917_RS05775 (B10331_11260) | thiE | 1106396..1107028 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| R8917_RS05780 (B10331_11270) | thiD | 1107018..1107830 (-) | 813 | WP_002873290.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| R8917_RS05785 (B10331_11280) | - | 1107827..1108513 (-) | 687 | WP_002852847.1 | endonuclease III domain-containing protein | - |
| R8917_RS05790 (B10331_11290) | - | 1108510..1109271 (-) | 762 | WP_052801071.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12222.36 Da Isoelectric Point: 6.2957
>NTDB_id=104516 R8917_RS05755 WP_317725436.1 1104382..1104684(+) (ctsT) [Campylobacter jejuni strain BCH-10331]
MKKAFILIESISAITIIFLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIIFLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=104516 R8917_RS05755 WP_317725436.1 1104382..1104684(+) (ctsT) [Campylobacter jejuni strain BCH-10331]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATTTTTAATTTTCATTGGTATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATTTTTAATTTTCATTGGTATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
98 |
100 |
0.98 |