Detailed information NTG1045149

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: QQG90_RS24240
• Genome accession: NZ_OX637964
• Coordinates: 4898425..4899450 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644908.1
• Uniprot ID: -
• Organism: Escherichia coli O25b:H4-ST131 isolate 46
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4893425..4904450

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QQG90_RS24220	metJ	4894610..4894927 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
QQG90_RS24225	yiiX	4894987..4895595 (+)	609	WP_000702314.1	YiiX family permuted papain-like enzyme	-
QQG90_RS24230	rpmE	4895656..4895868 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
QQG90_RS24235	priA	4896071..4898269 (+)	2199	WP_001296625.1	primosomal protein N'	Machinery gene
QQG90_RS24240	cytR	4898425..4899450 (+)	1026	WP_000644908.1	DNA-binding transcriptional regulator CytR	Regulator
QQG90_RS24245	ftsN	4899542..4900501 (+)	960	WP_000068834.1	cell division protein FtsN	-
QQG90_RS24250	hslV	4900594..4901124 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
QQG90_RS24255	hslU	4901134..4902465 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
QQG90_RS24260	menA	4902532..4903458 (+)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
QQG90_RS24265	rraA	4903551..4904036 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
QQG90_RS24270	zapB	4904121..4904366 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37847.80 Da
• Isoelectric Point: 6.3842

>NTDB_id=1045149 QQG90_RS24240 WP_000644908.1 4898425..4899450(+) (cytR) [Escherichia coli O25b:H4-ST131 isolate 46]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSRAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=1045149 QQG90_RS24240 WP_000644908.1 4898425..4899450(+) (cytR) [Escherichia coli O25b:H4-ST131 isolate 46]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAGAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGTCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625