Detailed information
Bioinformatically predicted
Overview
| Name | pepF | Type | Regulator |
| Locus tag | ACEPSP_RS05345 | Genome accession | NZ_CP168695 |
| Coordinates | 1151784..1153592 (+) | Length | 602 a.a. |
| NCBI ID | WP_375792988.1 | Uniprot ID | - |
| Organism | Levilactobacillus parabrevis strain FUA 30079 | ||
| Function | degradation of XIP; competence shut-off (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1146784..1158592
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACEPSP_RS05320 | - | 1146950..1147684 (+) | 735 | WP_020089251.1 | ABC transporter ATP-binding protein | - |
| ACEPSP_RS05325 | - | 1147681..1148907 (+) | 1227 | WP_395323039.1 | ABC transporter permease | - |
| ACEPSP_RS05330 | - | 1148966..1149757 (+) | 792 | WP_260339953.1 | phosphotransferase family protein | - |
| ACEPSP_RS05335 | trmB | 1149820..1150473 (+) | 654 | WP_395323040.1 | tRNA (guanosine(46)-N7)-methyltransferase TrmB | - |
| ACEPSP_RS05340 | - | 1150615..1151700 (+) | 1086 | WP_395323041.1 | competence protein CoiA | - |
| ACEPSP_RS05345 | pepF | 1151784..1153592 (+) | 1809 | WP_375792988.1 | oligoendopeptidase F | Regulator |
| ACEPSP_RS05350 | - | 1153706..1154566 (-) | 861 | WP_395323043.1 | DegV family protein | - |
| ACEPSP_RS05355 | - | 1154717..1155367 (-) | 651 | WP_395323044.1 | DsbA family protein | - |
| ACEPSP_RS05360 | - | 1155684..1156343 (+) | 660 | WP_020089259.1 | GTP pyrophosphokinase family protein | - |
| ACEPSP_RS05365 | - | 1156348..1157151 (+) | 804 | WP_020089260.1 | NAD kinase | - |
| ACEPSP_RS05370 | - | 1157148..1158059 (+) | 912 | WP_395323045.1 | RluA family pseudouridine synthase | - |
Sequence
Protein
Download Length: 602 a.a. Molecular weight: 67388.39 Da Isoelectric Point: 4.7752
>NTDB_id=1045054 ACEPSP_RS05345 WP_375792988.1 1151784..1153592(+) (pepF) [Levilactobacillus parabrevis strain FUA 30079]
MKQIPERAAVPEALTWDLTPIYADDAAFKQAVAAIKAQAKQVATKQGQLAESAGDLYEVTAAIFDLNRQLEKVYVYASLK
NDQDTSDANAQALSGQAESLVATVAAATSWYEPEVLALPQVVLQALIDAEPRLTEYQHFFDVLGKQRDHTLSATEEKLLA
GASDIFGASAKTYSVLSDADLKFPVVQDEAGNDVQLSEGLYGVLLQSTQPKVREQAFKALYSVYQQFRHTFASTLSSEVK
THNFSAEVRHYGSAREAAMSSNNVPAVVYDTLVKTVNDHLDSLHQYVNLRKEILGLPELHMYDLYTPITGEPSLSYTYPE
AQQEALKALSVLGPDYVANVQKMFDGRAIDVVENKGKRTGAYSGGMYDTKPYILLNWQDSLESLFTLVHEMGHSMHSHYT
RTNQPYQYGDYSIFVAEIASTTNENLLTDYLLKTQTDPQVRAYVLNHYLDGFKGTVYRQTQFAEFEDYIHQQAAAGETLT
ADFMSKFYGDLNQRYYGDGVISDPQIADEWTRIPHFYYDYYVYQYSTGFAAATTLAQRVLSGDVAKRDAYLNYLKSGSSA
LPIEVMQKAGVDMTKPDYLETAFKTFDDRLAEFSKLARELKK
MKQIPERAAVPEALTWDLTPIYADDAAFKQAVAAIKAQAKQVATKQGQLAESAGDLYEVTAAIFDLNRQLEKVYVYASLK
NDQDTSDANAQALSGQAESLVATVAAATSWYEPEVLALPQVVLQALIDAEPRLTEYQHFFDVLGKQRDHTLSATEEKLLA
GASDIFGASAKTYSVLSDADLKFPVVQDEAGNDVQLSEGLYGVLLQSTQPKVREQAFKALYSVYQQFRHTFASTLSSEVK
THNFSAEVRHYGSAREAAMSSNNVPAVVYDTLVKTVNDHLDSLHQYVNLRKEILGLPELHMYDLYTPITGEPSLSYTYPE
AQQEALKALSVLGPDYVANVQKMFDGRAIDVVENKGKRTGAYSGGMYDTKPYILLNWQDSLESLFTLVHEMGHSMHSHYT
RTNQPYQYGDYSIFVAEIASTTNENLLTDYLLKTQTDPQVRAYVLNHYLDGFKGTVYRQTQFAEFEDYIHQQAAAGETLT
ADFMSKFYGDLNQRYYGDGVISDPQIADEWTRIPHFYYDYYVYQYSTGFAAATTLAQRVLSGDVAKRDAYLNYLKSGSSA
LPIEVMQKAGVDMTKPDYLETAFKTFDDRLAEFSKLARELKK
Nucleotide
Download Length: 1809 bp
>NTDB_id=1045054 ACEPSP_RS05345 WP_375792988.1 1151784..1153592(+) (pepF) [Levilactobacillus parabrevis strain FUA 30079]
ATGAAACAAATTCCCGAACGCGCGGCAGTTCCCGAGGCTTTGACCTGGGATCTGACCCCGATTTATGCCGATGACGCGGC
CTTTAAGCAGGCCGTTGCCGCAATTAAGGCGCAAGCCAAACAGGTGGCGACCAAGCAAGGCCAACTCGCAGAAAGTGCGG
GCGACCTTTATGAAGTAACCGCCGCCATTTTTGACCTTAACCGTCAGCTGGAAAAGGTGTACGTGTATGCCTCCCTTAAA
AACGATCAAGACACCAGCGATGCCAATGCCCAAGCTTTATCTGGCCAAGCCGAAAGCTTAGTTGCAACGGTGGCTGCGGC
AACCTCCTGGTACGAACCAGAAGTACTTGCTTTGCCACAGGTCGTCTTGCAAGCGTTGATTGACGCGGAACCACGCTTAA
CTGAATATCAACACTTCTTCGATGTCTTAGGGAAACAACGCGATCACACGTTGTCTGCGACTGAGGAAAAGCTGCTGGCC
GGTGCCAGTGATATTTTCGGGGCTTCCGCCAAGACCTACAGTGTCTTGAGCGACGCCGACTTGAAGTTCCCCGTAGTTCA
GGACGAAGCGGGCAATGACGTTCAGCTTTCCGAAGGCTTATACGGCGTCTTACTGCAATCAACTCAACCAAAGGTCCGTG
AACAAGCCTTTAAAGCCCTGTACAGCGTTTATCAACAATTCCGGCATACATTTGCCAGCACGTTGTCCAGCGAGGTTAAA
ACGCATAATTTCAGTGCTGAGGTCCGGCATTACGGGAGCGCTCGTGAGGCTGCAATGAGCAGTAATAACGTGCCTGCTGT
CGTTTATGATACGCTGGTCAAGACGGTCAATGACCACTTGGATTCCCTGCATCAGTACGTGAACCTGCGTAAAGAGATTC
TCGGGTTGCCCGAACTCCACATGTATGACCTGTATACGCCGATTACGGGGGAACCCAGCCTGTCGTATACCTATCCAGAG
GCTCAGCAGGAAGCGCTCAAGGCCCTCAGTGTGCTGGGCCCAGATTACGTGGCCAACGTGCAGAAGATGTTTGATGGCCG
TGCAATTGATGTGGTTGAAAACAAGGGTAAGCGGACTGGCGCTTATTCCGGTGGGATGTATGACACCAAGCCTTACATCC
TCCTGAACTGGCAGGATAGCCTGGAAAGTCTGTTCACATTGGTTCACGAAATGGGTCATAGCATGCACAGCCACTATACC
CGGACCAATCAACCTTACCAATACGGGGATTACTCGATCTTTGTGGCGGAAATTGCATCAACGACTAACGAAAATCTTCT
AACGGATTACCTATTAAAGACGCAGACGGACCCACAAGTTAGAGCCTACGTTCTGAATCATTACCTGGATGGCTTCAAGG
GAACGGTCTACCGTCAAACCCAGTTTGCTGAATTTGAAGATTACATTCACCAACAAGCAGCAGCCGGTGAGACGTTGACC
GCGGACTTCATGAGTAAGTTCTACGGTGACCTGAACCAGCGCTACTATGGCGATGGGGTCATCTCTGATCCCCAGATTGC
GGACGAATGGACGCGAATCCCACACTTCTATTATGACTACTACGTTTATCAGTATTCCACTGGATTTGCGGCCGCAACCA
CATTGGCCCAACGCGTCCTGAGTGGGGATGTCGCTAAGCGTGATGCCTACCTGAACTACTTGAAGTCTGGGAGCTCCGCT
TTACCAATTGAAGTGATGCAAAAGGCAGGGGTCGACATGACCAAGCCAGATTATTTGGAAACGGCATTTAAGACCTTCGA
CGACCGACTGGCTGAATTCAGTAAGTTAGCGCGTGAGTTGAAGAAGTAA
ATGAAACAAATTCCCGAACGCGCGGCAGTTCCCGAGGCTTTGACCTGGGATCTGACCCCGATTTATGCCGATGACGCGGC
CTTTAAGCAGGCCGTTGCCGCAATTAAGGCGCAAGCCAAACAGGTGGCGACCAAGCAAGGCCAACTCGCAGAAAGTGCGG
GCGACCTTTATGAAGTAACCGCCGCCATTTTTGACCTTAACCGTCAGCTGGAAAAGGTGTACGTGTATGCCTCCCTTAAA
AACGATCAAGACACCAGCGATGCCAATGCCCAAGCTTTATCTGGCCAAGCCGAAAGCTTAGTTGCAACGGTGGCTGCGGC
AACCTCCTGGTACGAACCAGAAGTACTTGCTTTGCCACAGGTCGTCTTGCAAGCGTTGATTGACGCGGAACCACGCTTAA
CTGAATATCAACACTTCTTCGATGTCTTAGGGAAACAACGCGATCACACGTTGTCTGCGACTGAGGAAAAGCTGCTGGCC
GGTGCCAGTGATATTTTCGGGGCTTCCGCCAAGACCTACAGTGTCTTGAGCGACGCCGACTTGAAGTTCCCCGTAGTTCA
GGACGAAGCGGGCAATGACGTTCAGCTTTCCGAAGGCTTATACGGCGTCTTACTGCAATCAACTCAACCAAAGGTCCGTG
AACAAGCCTTTAAAGCCCTGTACAGCGTTTATCAACAATTCCGGCATACATTTGCCAGCACGTTGTCCAGCGAGGTTAAA
ACGCATAATTTCAGTGCTGAGGTCCGGCATTACGGGAGCGCTCGTGAGGCTGCAATGAGCAGTAATAACGTGCCTGCTGT
CGTTTATGATACGCTGGTCAAGACGGTCAATGACCACTTGGATTCCCTGCATCAGTACGTGAACCTGCGTAAAGAGATTC
TCGGGTTGCCCGAACTCCACATGTATGACCTGTATACGCCGATTACGGGGGAACCCAGCCTGTCGTATACCTATCCAGAG
GCTCAGCAGGAAGCGCTCAAGGCCCTCAGTGTGCTGGGCCCAGATTACGTGGCCAACGTGCAGAAGATGTTTGATGGCCG
TGCAATTGATGTGGTTGAAAACAAGGGTAAGCGGACTGGCGCTTATTCCGGTGGGATGTATGACACCAAGCCTTACATCC
TCCTGAACTGGCAGGATAGCCTGGAAAGTCTGTTCACATTGGTTCACGAAATGGGTCATAGCATGCACAGCCACTATACC
CGGACCAATCAACCTTACCAATACGGGGATTACTCGATCTTTGTGGCGGAAATTGCATCAACGACTAACGAAAATCTTCT
AACGGATTACCTATTAAAGACGCAGACGGACCCACAAGTTAGAGCCTACGTTCTGAATCATTACCTGGATGGCTTCAAGG
GAACGGTCTACCGTCAAACCCAGTTTGCTGAATTTGAAGATTACATTCACCAACAAGCAGCAGCCGGTGAGACGTTGACC
GCGGACTTCATGAGTAAGTTCTACGGTGACCTGAACCAGCGCTACTATGGCGATGGGGTCATCTCTGATCCCCAGATTGC
GGACGAATGGACGCGAATCCCACACTTCTATTATGACTACTACGTTTATCAGTATTCCACTGGATTTGCGGCCGCAACCA
CATTGGCCCAACGCGTCCTGAGTGGGGATGTCGCTAAGCGTGATGCCTACCTGAACTACTTGAAGTCTGGGAGCTCCGCT
TTACCAATTGAAGTGATGCAAAAGGCAGGGGTCGACATGACCAAGCCAGATTATTTGGAAACGGCATTTAAGACCTTCGA
CGACCGACTGGCTGAATTCAGTAAGTTAGCGCGTGAGTTGAAGAAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pepF | Streptococcus salivarius strain HSISS4 |
50.422 |
98.505 |
0.497 |