Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | R8901_RS05585 | Genome accession | NZ_AP028342 |
| Coordinates | 1079391..1079693 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain BCH-10330 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1074391..1084693
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R8901_RS05560 (B10330_11030) | rpsR | 1074754..1075014 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| R8901_RS05565 (B10330_11040) | lon | 1075074..1077449 (-) | 2376 | WP_002853487.1 | endopeptidase La | - |
| R8901_RS05570 (B10330_11050) | - | 1077466..1078113 (-) | 648 | WP_011049880.1 | outer membrane protein assembly factor BamD | - |
| R8901_RS05575 (B10330_11060) | fliW | 1078274..1078663 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| R8901_RS05580 (B10330_11070) | proC | 1078663..1079394 (+) | 732 | WP_002859150.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| R8901_RS05585 (B10330_11080) | ctsT | 1079391..1079693 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| R8901_RS05590 (B10330_11090) | - | 1079690..1080352 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| R8901_RS05595 (B10330_11100) | - | 1080349..1080801 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| R8901_RS05600 (B10330_11110) | hemD | 1080798..1081427 (-) | 630 | WP_002859147.1 | uroporphyrinogen-III synthase | - |
| R8901_RS05605 (B10330_11120) | thiE | 1081405..1082037 (-) | 633 | WP_060809525.1 | thiamine phosphate synthase | - |
| R8901_RS05610 (B10330_11130) | thiD | 1082027..1082839 (-) | 813 | WP_002852691.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| R8901_RS05615 (B10330_11140) | - | 1082836..1083522 (-) | 687 | WP_060809526.1 | endonuclease III domain-containing protein | - |
| R8901_RS05620 (B10330_11150) | - | 1083519..1084280 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=104489 R8901_RS05585 WP_002853046.1 1079391..1079693(+) (ctsT) [Campylobacter jejuni strain BCH-10330]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=104489 R8901_RS05585 WP_002853046.1 1079391..1079693(+) (ctsT) [Campylobacter jejuni strain BCH-10330]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |