Detailed information NTG1044838

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ACEO96_RS12990
• Genome accession: NZ_CP168657
• Coordinates: 2828639..2829646 (-)
• Length: 335 a.a.
• NCBI ID: WP_017043195.1
• Uniprot ID: A0AAW8GSK0
• Organism: Vibrio anguillarum strain VA1
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 2823639..2834646

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACEO96_RS12960 (ACEO96_12960)	-	2823872..2824063 (-)	192	Protein_2474	IS481 family transposase	-
ACEO96_RS12965 (ACEO96_12965)	rraA	2824302..2824823 (-)	522	WP_199871671.1	ribonuclease E activity regulator RraA	-
ACEO96_RS12970 (ACEO96_12970)	-	2824900..2825817 (-)	918	WP_017043197.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ACEO96_RS12975 (ACEO96_12975)	hslU	2825940..2827271 (-)	1332	WP_373433109.1	HslU--HslV peptidase ATPase subunit	-
ACEO96_RS12980 (ACEO96_12980)	hslV	2827307..2827873 (-)	567	WP_010317615.1	ATP-dependent protease subunit HslV	-
ACEO96_RS12985 (ACEO96_12985)	-	2827994..2828536 (-)	543	WP_013855850.1	SPOR domain-containing protein	-
ACEO96_RS12990 (ACEO96_12990)	cytR	2828639..2829646 (-)	1008	WP_017043195.1	DNA-binding transcriptional regulator CytR	Regulator
ACEO96_RS12995 (ACEO96_12995)	priA	2829952..2832153 (-)	2202	WP_373433110.1	primosomal protein N'	-
ACEO96_RS13000 (ACEO96_13000)	rpmE	2832422..2832637 (+)	216	WP_010318344.1	50S ribosomal protein L31	-
ACEO96_RS13005 (ACEO96_13005)	-	2832843..2834120 (+)	1278	WP_047690604.1	malic enzyme-like NAD(P)-binding protein	-
ACEO96_RS13010 (ACEO96_13010)	metJ	2834269..2834595 (-)	327	WP_010318342.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 36770.41 Da
• Isoelectric Point: 6.6397

>NTDB_id=1044838 ACEO96_RS12990 WP_017043195.1 2828639..2829646(-) (cytR) [Vibrio anguillarum strain VA1]
MATMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEDAVLEAGYSPNSLARNLRRNESKTIVAIVPDICDPYFTEIIRG
IEDAAMEHGYLVLLGDSGQQKKRESSLVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLTQLGHKRIAQISGPAEATLCKFRHQGYQQALRRAGITMNPNYCTYGDFTFEAGAKALRQLLALSEPPTA
IFSHNDSMAIGVIKEAKKLGLRVPQDISVVGFDDIQFALYCDPPLTTISQPRYEIGRQAMLMMLDLLRGQEVGAGSRLLE
TKLVIRESAAPPRLS

Nucleotide

• Length: 1008 bp

>NTDB_id=1044838 ACEO96_RS12990 WP_017043195.1 2828639..2829646(-) (cytR) [Vibrio anguillarum strain VA1]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCAGGTGTATCAACCGCCACAGTATCTAGGGCGTTGATGAACCCTGAAAA
AGTATCATCTTCAACGCGAAAGCGTGTTGAAGATGCTGTTTTGGAAGCTGGTTACTCACCAAATTCTCTCGCTCGCAACT
TACGTCGTAATGAATCTAAAACTATTGTCGCTATCGTGCCTGATATTTGTGACCCTTACTTCACAGAGATCATTCGTGGC
ATCGAAGATGCGGCGATGGAACATGGTTATTTAGTACTGTTGGGTGATAGTGGTCAGCAGAAAAAGCGAGAAAGTTCGTT
AGTTAACCTCGTATTTACTAAGCAGGCCGATGGCATGTTGTTGCTGGGAACGGATTTGCCGTTTGATGTTAGTAAGCCGG
AGCAAAAAAACCTGCCACCTATGGTCATGGCATGTGAATTTGCGCCAGAACTTGAGTTGCCGACGGTACATATTGATAAC
CTTACTTCAGCGTTTGAAGCGGTGAACTATTTGACGCAGCTCGGGCACAAACGCATCGCGCAAATATCGGGGCCAGCAGA
GGCCACGCTGTGTAAGTTCCGCCATCAAGGTTATCAACAAGCCTTACGCCGTGCAGGAATTACCATGAACCCTAATTATT
GCACTTATGGTGATTTTACTTTTGAAGCTGGGGCTAAAGCACTGCGCCAATTATTGGCGTTATCTGAGCCACCCACAGCC
ATTTTTAGTCATAATGACAGTATGGCTATCGGTGTCATTAAGGAAGCCAAAAAATTGGGTTTGCGCGTTCCACAAGATAT
TTCAGTGGTGGGATTTGATGATATTCAATTTGCGCTCTACTGCGATCCACCGTTAACGACCATCTCACAGCCGCGCTATG
AGATAGGACGTCAAGCGATGCTCATGATGCTCGATCTTCTTCGCGGTCAAGAGGTTGGCGCAGGTTCTCGACTATTAGAA
ACCAAGTTAGTGATTCGAGAAAGCGCAGCGCCTCCTCGCTTGAGCTAA

Domains

Predicted by InterproScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	92.169	99.104	0.913
cytR	Vibrio parahaemolyticus RIMD 2210633	87.387	99.403	0.869